Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0105
         (661 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X73608-1|CAA51999.1|  439|Homo sapiens testican protein.               30   6.4  
BC126459-1|AAI26460.1|  257|Homo sapiens chromosome 10 open read...    30   6.4  
BC030691-1|AAH30691.1|  439|Homo sapiens sparc/osteonectin, cwcv...    30   6.4  
AL121928-10|CAI12523.1|  257|Homo sapiens novel protein protein.       30   6.4  
AK024342-1|BAB14892.1|  257|Homo sapiens protein ( Homo sapiens ...    30   6.4  
AF231124-1|AAF43687.1|  439|Homo sapiens testican-1 protein.           30   6.4  
AC005213-1|AAC24945.1|  203|Homo sapiens testican protein.             30   6.4  
AB209701-1|BAD92938.1|  484|Homo sapiens sparc/osteonectin, cwcv...    30   6.4  

>X73608-1|CAA51999.1|  439|Homo sapiens testican protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 536 PCIKGISNSCHQMKECEMSDHSW 468
           PCIK + NSC   K+ ++S++ W
Sbjct: 279 PCIKPLFNSCDSFKDGKLSNNEW 301


>BC126459-1|AAI26460.1|  257|Homo sapiens chromosome 10 open reading
           frame 95 protein.
          Length = 257

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
 Frame = -3

Query: 650 GGAKPSCAGFIMPTCGAAWC----NCVY*ICVFWTPDPGACCPCIKGISNS-CHQMKECE 486
           G  KPSCAG      GA  C    +C         P P   C      ++S C + + C 
Sbjct: 162 GACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASSCCRRRRACS 221

Query: 485 MSDHSWRTHC 456
               +W   C
Sbjct: 222 SPTTAWSGAC 231


>BC030691-1|AAH30691.1|  439|Homo sapiens sparc/osteonectin, cwcv
           and kazal-like domains proteoglycan (testican) 1
           protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 536 PCIKGISNSCHQMKECEMSDHSW 468
           PCIK + NSC   K+ ++S++ W
Sbjct: 279 PCIKPLFNSCDSFKDGKLSNNEW 301


>AL121928-10|CAI12523.1|  257|Homo sapiens novel protein protein.
          Length = 257

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
 Frame = -3

Query: 650 GGAKPSCAGFIMPTCGAAWC----NCVY*ICVFWTPDPGACCPCIKGISNS-CHQMKECE 486
           G  KPSCAG      GA  C    +C         P P   C      ++S C + + C 
Sbjct: 162 GACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASSCCRRRRACS 221

Query: 485 MSDHSWRTHC 456
               +W   C
Sbjct: 222 SPTTAWSGAC 231


>AK024342-1|BAB14892.1|  257|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
           TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
          Length = 257

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
 Frame = -3

Query: 650 GGAKPSCAGFIMPTCGAAWC----NCVY*ICVFWTPDPGACCPCIKGISNS-CHQMKECE 486
           G  KPSCAG      GA  C    +C         P P   C      ++S C + + C 
Sbjct: 162 GACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASSCCRRRRACS 221

Query: 485 MSDHSWRTHC 456
               +W   C
Sbjct: 222 SPTTAWSGAC 231


>AF231124-1|AAF43687.1|  439|Homo sapiens testican-1 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 536 PCIKGISNSCHQMKECEMSDHSW 468
           PCIK + NSC   K+ ++S++ W
Sbjct: 279 PCIKPLFNSCDSFKDGKLSNNEW 301


>AC005213-1|AAC24945.1|  203|Homo sapiens testican protein.
          Length = 203

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 536 PCIKGISNSCHQMKECEMSDHSW 468
           PCIK + NSC   K+ ++S++ W
Sbjct: 43  PCIKPLFNSCDSFKDGKLSNNEW 65


>AB209701-1|BAD92938.1|  484|Homo sapiens sparc/osteonectin, cwcv
           and kazal-like domains proteoglycan precursor variant
           protein.
          Length = 484

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 536 PCIKGISNSCHQMKECEMSDHSW 468
           PCIK + NSC   K+ ++S++ W
Sbjct: 324 PCIKPLFNSCDSFKDGKLSNNEW 346


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,971,617
Number of Sequences: 237096
Number of extensions: 2223909
Number of successful extensions: 5587
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5587
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)