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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0079
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36188-1|AAA93254.1|  435|Homo sapiens assembly protein 50 protein.   143   6e-34
D63475-1|BAA09762.2|  438|Homo sapiens KIAA0109 protein.              143   6e-34
BT007308-1|AAP35972.1|  435|Homo sapiens adaptor-related protein...   143   6e-34
BC014030-1|AAH14030.1|  435|Homo sapiens adaptor-related protein...   143   6e-34
BC013796-1|AAH13796.1|  433|Homo sapiens adaptor-related protein...   143   6e-34
BC004996-1|AAH04996.1|  435|Homo sapiens adaptor-related protein...   143   6e-34
BC005021-1|AAH05021.1|  425|Homo sapiens adaptor-related protein...    46   1e-04
BC003612-1|AAH03612.1|  423|Homo sapiens adaptor-related protein...    46   1e-04
BC003387-1|AAH03387.1|  423|Homo sapiens adaptor-related protein...    46   1e-04
AK222946-1|BAD96666.1|  423|Homo sapiens adaptor-related protein...    46   1e-04
AF020797-1|AAD25870.2|  423|Homo sapiens AP-mu chain family memb...    46   1e-04
DQ059565-1|AAY54246.1|  435|Homo sapiens leukemia T cell specifi...    44   5e-04
BC017469-1|AAH17469.1|  423|Homo sapiens adaptor-related protein...    44   5e-04
AF290613-1|AAK28024.1|  423|Homo sapiens clathrin-associated pro...    44   5e-04
AB209808-1|BAD93045.1|  466|Homo sapiens adaptor-related protein...    44   5e-04
BC048979-1|AAH48979.1|  157|Homo sapiens Rieske (Fe-S) domain co...    30   8.2  
BC035110-1|AAH35110.1|  157|Homo sapiens Rieske (Fe-S) domain co...    30   8.2  
BC024023-1|AAH24023.1|  157|Homo sapiens RFESD protein protein.        30   8.2  

>U36188-1|AAA93254.1|  435|Homo sapiens assembly protein 50 protein.
          Length = 435

 Score =  143 bits (346), Expect = 6e-34
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 23  VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
           V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381

Query: 203 TRPPISMGFEVPFAPSG 253
            RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
           +KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435


>D63475-1|BAA09762.2|  438|Homo sapiens KIAA0109 protein.
          Length = 438

 Score =  143 bits (346), Expect = 6e-34
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 23  VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
           V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 325 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 384

Query: 203 TRPPISMGFEVPFAPSG 253
            RPPISM FEVPFAPSG
Sbjct: 385 ARPPISMNFEVPFAPSG 401



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
           +KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 402 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 438


>BT007308-1|AAP35972.1|  435|Homo sapiens adaptor-related protein
           complex 2, mu 1 subunit protein.
          Length = 435

 Score =  143 bits (346), Expect = 6e-34
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 23  VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
           V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381

Query: 203 TRPPISMGFEVPFAPSG 253
            RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
           +KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435


>BC014030-1|AAH14030.1|  435|Homo sapiens adaptor-related protein
           complex 2, mu 1 subunit protein.
          Length = 435

 Score =  143 bits (346), Expect = 6e-34
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 23  VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
           V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381

Query: 203 TRPPISMGFEVPFAPSG 253
            RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
           +KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435


>BC013796-1|AAH13796.1|  433|Homo sapiens adaptor-related protein
           complex 2, mu 1 subunit protein.
          Length = 433

 Score =  143 bits (346), Expect = 6e-34
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 23  VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
           V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 320 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 379

Query: 203 TRPPISMGFEVPFAPSG 253
            RPPISM FEVPFAPSG
Sbjct: 380 ARPPISMNFEVPFAPSG 396



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
           +KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 397 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 433


>BC004996-1|AAH04996.1|  435|Homo sapiens adaptor-related protein
           complex 2, mu 1 subunit protein.
          Length = 435

 Score =  143 bits (346), Expect = 6e-34
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 23  VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
           V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381

Query: 203 TRPPISMGFEVPFAPSG 253
            RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
           +KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435


>BC005021-1|AAH05021.1|  425|Homo sapiens adaptor-related protein
           complex 1, mu 2 subunit protein.
          Length = 425

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
           G AKY    N ++W IK   G KE  + A   L   + ++   RPPI + FE+P+
Sbjct: 332 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPRVEKEEVEGRPPIGVKFEIPY 386



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           I+VRY+K+ E     S +  + WVRYI +SG Y+ R
Sbjct: 392 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 423


>BC003612-1|AAH03612.1|  423|Homo sapiens adaptor-related protein
           complex 1, mu 2 subunit protein.
          Length = 423

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
           G AKY    N ++W IK   G KE  + A   L   + ++   RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           I+VRY+K+ E     S +  + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421


>BC003387-1|AAH03387.1|  423|Homo sapiens adaptor-related protein
           complex 1, mu 2 subunit protein.
          Length = 423

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
           G AKY    N ++W IK   G KE  + A   L   + ++   RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           I+VRY+K+ E     S +  + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421


>AK222946-1|BAD96666.1|  423|Homo sapiens adaptor-related protein
           complex 1, mu 2 subunit variant protein.
          Length = 423

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
           G AKY    N ++W IK   G KE  + A   L   + ++   RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           I+VRY+K+ E     S +  + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421


>AF020797-1|AAD25870.2|  423|Homo sapiens AP-mu chain family member
           mu1B protein.
          Length = 423

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
           G AKY    N ++W IK   G KE  + A   L   + ++   RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           I+VRY+K+ E     S +  + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421


>DQ059565-1|AAY54246.1|  435|Homo sapiens leukemia T cell specific
           adaptor-related protein 1 mu1 subunit protein.
          Length = 435

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
           G  K+    + IVW IK   G KE  + A   L   + + K  +PPIS+ FE+P F  SG
Sbjct: 342 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 401



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +1

Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           T  I+VRYLK+ E     S +  + WVRYI ++G Y+ R
Sbjct: 399 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 433


>BC017469-1|AAH17469.1|  423|Homo sapiens adaptor-related protein
           complex 1, mu 1 subunit protein.
          Length = 423

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
           G  K+    + IVW IK   G KE  + A   L   + + K  +PPIS+ FE+P F  SG
Sbjct: 330 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 389



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +1

Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           T  I+VRYLK+ E     S +  + WVRYI ++G Y+ R
Sbjct: 387 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 421


>AF290613-1|AAK28024.1|  423|Homo sapiens clathrin-associated
           protein AP47 protein.
          Length = 423

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
           G  K+    + IVW IK   G KE  + A   L   + + K  +PPIS+ FE+P F  SG
Sbjct: 330 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 389



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +1

Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           T  I+VRYLK+ E     S +  + WVRYI ++G Y+ R
Sbjct: 387 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 421


>AB209808-1|BAD93045.1|  466|Homo sapiens adaptor-related protein
           complex 1, mu 1 subunit variant protein.
          Length = 466

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 77  GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
           G  K+    + IVW IK   G KE  + A   L   + + K  +PPIS+ FE+P F  SG
Sbjct: 373 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 432



 Score = 33.5 bits (73), Expect = 0.67
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +1

Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
           T  I+VRYLK+ E     S +  + WVRYI ++G Y+ R
Sbjct: 430 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 464


>BC048979-1|AAH48979.1|  157|Homo sapiens Rieske (Fe-S) domain
           containing protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 95  LYTSLSPSSKSVAPRWCSAELKSSL 21
           LY S++P   S  P+WCS  +K  +
Sbjct: 95  LYQSINPKDPSAKPKWCSKGIKQRI 119


>BC035110-1|AAH35110.1|  157|Homo sapiens Rieske (Fe-S) domain
           containing protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 95  LYTSLSPSSKSVAPRWCSAELKSSL 21
           LY S++P   S  P+WCS  +K  +
Sbjct: 95  LYQSINPKDPSAKPKWCSKGIKQRI 119


>BC024023-1|AAH24023.1|  157|Homo sapiens RFESD protein protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 95  LYTSLSPSSKSVAPRWCSAELKSSL 21
           LY S++P   S  P+WCS  +K  +
Sbjct: 95  LYQSINPKDPSAKPKWCSKGIKQRI 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,922,319
Number of Sequences: 237096
Number of extensions: 1320005
Number of successful extensions: 3595
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3595
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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