Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b02
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097404-1|BAC05037.1|  416|Homo sapiens protein ( Homo sapiens ...    32   2.1  
BC069271-1|AAH69271.1|  454|Homo sapiens KLHL29 protein protein.       31   3.6  
AY358236-1|AAQ88603.1|  183|Homo sapiens QCWQ6494 protein.             31   3.6  
AK024168-1|BAB14844.1|  228|Homo sapiens protein ( Homo sapiens ...    31   3.6  
DQ020495-1|AAY84832.1|  754|Homo sapiens neuroblastoma apoptosis...    30   8.3  
AB209038-1|BAD92275.1|  100|Homo sapiens ubiquitin carboxyl-term...    30   8.3  

>AK097404-1|BAC05037.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40085 fis, clone TESTI2002993. ).
          Length = 416

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 118 RRRWTPPAVAPGPRDPSHMLGRSRCT-RVPWHSPAALPEC 2
           R R++ PA +PGP  P   L R  CT R     PA  P C
Sbjct: 11  RPRFSLPAASPGPEPPQVGLSRPTCTLRASSPGPALPPGC 50


>BC069271-1|AAH69271.1|  454|Homo sapiens KLHL29 protein protein.
          Length = 454

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 76  DPSHMLGRSRCTRVPWHSPAALPEC 2
           DP H  G+S C  VP H PA+ P C
Sbjct: 335 DPGHPRGKS-CCHVPPHGPASAPPC 358


>AY358236-1|AAQ88603.1|  183|Homo sapiens QCWQ6494 protein.
          Length = 183

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -3

Query: 177 SGRESSRRVTSVARPV-QRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLRCP 7
           SG + +++V  VA  + Q P        P    H   +TC G    R YP  VP R P
Sbjct: 114 SGPKVAKQVFQVAAELLQHPEHFVPSSVPEGCVHKPGSTCDGSLKGRAYPSCVPKRDP 171


>AK024168-1|BAB14844.1|  228|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14106 fis, clone MAMMA1001222, weakly similar to
           EBNA-2 NUCLEAR PROTEIN. ).
          Length = 228

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 76  DPSHMLGRSRCTRVPWHSPAALPEC 2
           DP H  G+S C  VP H PA+ P C
Sbjct: 109 DPGHPRGKS-CCHVPPHGPASAPPC 132


>DQ020495-1|AAY84832.1|  754|Homo sapiens neuroblastoma
           apoptosis-related protease protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 91  APGPRDPSHMLGRSRCTRVPWHSPAALP 8
           AP PR P  +LG  RC R+  H P  LP
Sbjct: 131 APEPRAPRDLLGCPRCRRL-LHKPVTLP 157


>AB209038-1|BAD92275.1|  100|Homo sapiens ubiquitin
           carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
           variant protein.
          Length = 100

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 29  PGYPRATRPPQHVAGVAWA-RCDGRRRPATSLG 124
           P  PR  RPP   AG   A RC+ RRRP   +G
Sbjct: 59  PRAPRRGRPPVPAAGRDQAARCEHRRRPGWGVG 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,535,471
Number of Sequences: 237096
Number of extensions: 1683519
Number of successful extensions: 8132
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8129
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)