Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a09
         (799 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB037798-1|BAA92615.1|  988|Homo sapiens KIAA1377 protein protein.     34   0.68 

>AB037798-1|BAA92615.1|  988|Homo sapiens KIAA1377 protein protein.
          Length = 988

 Score = 33.9 bits (74), Expect = 0.68
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = +1

Query: 22  QKTLR*CFGCDKNMNESVNIVAIVSKLLDSEKYKEALSIPYDEEHIENFKENCWEIVSV- 198
           QK L     C+K MNE++      SK +   K +E   +  +++H+ N ++ C E+  + 
Sbjct: 58  QKQLLSKINCEKEMNENMRATLATSKNVFQLKLEETQKL-LEDQHLSNLQKFCDEVNQIT 116

Query: 199 ---IIKKIDGDTLTIKPSLYAACEQLLSIILERST 294
               +  ID    T    +Y    +  S  ++R+T
Sbjct: 117 NSETLSSIDSLEATEHEEIYLTLNKEHSTSIQRNT 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,092,845
Number of Sequences: 237096
Number of extensions: 1867568
Number of successful extensions: 3699
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3699
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)