Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a01
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023602-1|AAH23602.1|  331|Homo sapiens hypothetical protein FL...    84   5e-16
BC008897-1|AAH08897.1|  331|Homo sapiens hypothetical protein FL...    84   5e-16
AK025875-1|BAB15267.1|  319|Homo sapiens protein ( Homo sapiens ...    84   5e-16

>BC023602-1|AAH23602.1|  331|Homo sapiens hypothetical protein
           FLJ22222 protein.
          Length = 331

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 44/116 (37%), Positives = 66/116 (56%)
 Frame = +1

Query: 427 LSRAVVIFSLLIIVYFTSNDGAFKIFAKQNEVISGKGQIVECSSAYLREIDKFEGCFPKQ 606
           L    V+ +LL+     ++DG  ++ A++ EV++G+   V CS  Y     +FEGC P++
Sbjct: 49  LGAGFVLTALLLWSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSH-RRFEGCTPRK 107

Query: 607 CKRFVTDKVITDKEVDELLMIAXXXXXXXXXXXXXXILDLHSGALSMGQHFXNFYK 774
           C R VTD VIT +E + +  +A              ILDLHSGALS+G+HF N Y+
Sbjct: 108 CGRGVTDVVITREEAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYR 163


>BC008897-1|AAH08897.1|  331|Homo sapiens hypothetical protein
           FLJ22222 protein.
          Length = 331

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 44/116 (37%), Positives = 66/116 (56%)
 Frame = +1

Query: 427 LSRAVVIFSLLIIVYFTSNDGAFKIFAKQNEVISGKGQIVECSSAYLREIDKFEGCFPKQ 606
           L    V+ +LL+     ++DG  ++ A++ EV++G+   V CS  Y     +FEGC P++
Sbjct: 49  LGAGFVLTALLLWSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSH-RRFEGCTPRK 107

Query: 607 CKRFVTDKVITDKEVDELLMIAXXXXXXXXXXXXXXILDLHSGALSMGQHFXNFYK 774
           C R VTD VIT +E + +  +A              ILDLHSGALS+G+HF N Y+
Sbjct: 108 CGRGVTDVVITREEAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYR 163


>AK025875-1|BAB15267.1|  319|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22222 fis, clone HRC01658. ).
          Length = 319

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 44/116 (37%), Positives = 66/116 (56%)
 Frame = +1

Query: 427 LSRAVVIFSLLIIVYFTSNDGAFKIFAKQNEVISGKGQIVECSSAYLREIDKFEGCFPKQ 606
           L    V+ +LL+     ++DG  ++ A++ EV++G+   V CS  Y     +FEGC P++
Sbjct: 49  LGAGFVLTALLLWSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSH-RRFEGCTPRK 107

Query: 607 CKRFVTDKVITDKEVDELLMIAXXXXXXXXXXXXXXILDLHSGALSMGQHFXNFYK 774
           C R VTD VIT +E + +  +A              ILDLHSGALS+G+HF N Y+
Sbjct: 108 CGRGVTDVVITREEAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYR 163


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,696,212
Number of Sequences: 237096
Number of extensions: 1494327
Number of successful extensions: 2155
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)