Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a15
         (239 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030831-1|AAH30831.1|  369|Homo sapiens translocation associate...    28   4.6  
AK074617-1|BAC11091.1|  369|Homo sapiens protein ( Homo sapiens ...    28   4.6  

>BC030831-1|AAH30831.1|  369|Homo sapiens translocation associated
           membrane protein 1-like 1 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 46  YAGLLWLATHYYFDSVFHKCAKYGLIYMKRNKY 144
           + GLL L  HY+ + + H C   GL Y    KY
Sbjct: 217 HLGLLLLVLHYFVELLSHMC---GLFYFSDEKY 246


>AK074617-1|BAC11091.1|  369|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90136 fis, clone HEMBB1000679, moderately
           similar to Translocation associated membrane protein 1.
           ).
          Length = 369

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 46  YAGLLWLATHYYFDSVFHKCAKYGLIYMKRNKY 144
           + GLL L  HY+ + + H C   GL Y    KY
Sbjct: 217 HLGLLLLVLHYFVELLSHMC---GLFYFSDEKY 246


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,192,079
Number of Sequences: 237096
Number of extensions: 453490
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)