Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0042
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050416-1|AAH50416.1|  553|Homo sapiens solute carrier family 4...    31   2.9  
AY033593-1|AAK54386.1|  553|Homo sapiens prostein protein.             31   2.9  
BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril int...    31   3.8  
BC009947-1|AAH09947.2|  580|Homo sapiens EMILIN1 protein protein.      31   3.8  
AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril int...    31   3.8  
AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein.     31   3.8  
AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein.              31   3.8  
AL137787-4|CAI42175.1| 1758|Homo sapiens FERM and PDZ domain con...    29   8.7  
AL035088-2|CAI42749.1| 1758|Homo sapiens FERM and PDZ domain con...    29   8.7  

>BC050416-1|AAH50416.1|  553|Homo sapiens solute carrier family 45,
           member 3 protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 233 DDLSVPSLREYTCPCRARNPYTTPGA 156
           + LS PSL  + CPCRAR  +   GA
Sbjct: 230 EGLSAPSLSPHCCPCRARLAFRNLGA 255


>AY033593-1|AAK54386.1|  553|Homo sapiens prostein protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 233 DDLSVPSLREYTCPCRARNPYTTPGA 156
           + LS PSL  + CPCRAR  +   GA
Sbjct: 230 EGLSAPSLSPHCCPCRARLAFRNLGA 255


>BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril
           interfacer 1 protein.
          Length = 1016

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 281 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 144
           LG +  + N SL+LLED L   SL++ T P     P   PG    P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831


>BC009947-1|AAH09947.2|  580|Homo sapiens EMILIN1 protein protein.
          Length = 580

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 281 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 144
           LG +  + N SL+LLED L   SL++ T P     P   PG    P
Sbjct: 350 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 395


>AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril
           interfase located protein protein.
          Length = 1016

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 281 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 144
           LG +  + N SL+LLED L   SL++ T P     P   PG    P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831


>AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein.
          Length = 1016

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 281 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 144
           LG +  + N SL+LLED L   SL++ T P     P   PG    P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831


>AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein.
          Length = 1016

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 281 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 144
           LG +  + N SL+LLED L   SL++ T P     P   PG    P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831


>AL137787-4|CAI42175.1| 1758|Homo sapiens FERM and PDZ domain
           containing 3 protein.
          Length = 1758

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 263 SRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSPKFLAS*FCHICQCTYHQQVR 84
           S  Q  E++ DD    SL    C  RAR+ YT    S   + L + +C  C+    +Q+ 
Sbjct: 549 SSGQGYEVVPDDFDAASLDHEPCASRARS-YTLDN-SLGAEAL-NFYCDSCKAKLQEQLG 605

Query: 83  PR 78
           PR
Sbjct: 606 PR 607


>AL035088-2|CAI42749.1| 1758|Homo sapiens FERM and PDZ domain
           containing 3 protein.
          Length = 1758

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 263 SRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSPKFLAS*FCHICQCTYHQQVR 84
           S  Q  E++ DD    SL    C  RAR+ YT    S   + L + +C  C+    +Q+ 
Sbjct: 549 SSGQGYEVVPDDFDAASLDHEPCASRARS-YTLDN-SLGAEAL-NFYCDSCKAKLQEQLG 605

Query: 83  PR 78
           PR
Sbjct: 606 PR 607


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,840,439
Number of Sequences: 237096
Number of extensions: 1368882
Number of successful extensions: 3676
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3676
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)