Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0020
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF338650-1|AAK07661.1| 2641|Homo sapiens PDZ domain-containing p...    33   0.77 
AB002298-1|BAA20760.2| 2847|Homo sapiens KIAA0300 protein.             33   0.77 

>AF338650-1|AAK07661.1| 2641|Homo sapiens PDZ domain-containing
            protein AIPC protein.
          Length = 2641

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -2

Query: 592  LSASILSTFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 434
            ++ + LS +  NF S  ++ T    L  STE  +    GD++ + SD    +E
Sbjct: 1317 VNKNFLSNYSRNFSSFHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTE 1369


>AB002298-1|BAA20760.2| 2847|Homo sapiens KIAA0300 protein.
          Length = 2847

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -2

Query: 592  LSASILSTFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 434
            ++ + LS +  NF S  ++ T    L  STE  +    GD++ + SD    +E
Sbjct: 1523 VNKNFLSNYSRNFSSFHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTE 1575


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,778,925
Number of Sequences: 237096
Number of extensions: 1474443
Number of successful extensions: 2545
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2545
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)