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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021016
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010993-1|AAH10993.2|  337|Homo sapiens calcium binding protein...    32   2.0  
AL138875-4|CAI10893.1|  337|Homo sapiens calcium binding protein...    32   2.0  
AL138875-3|CAI10892.1|  280|Homo sapiens calcium binding protein...    32   2.0  
AL136218-3|CAI10816.1|  337|Homo sapiens calcium binding protein...    32   2.0  
AL136218-1|CAI10814.1|  280|Homo sapiens calcium binding protein...    32   2.0  
AK022639-1|BAB14147.1|  289|Homo sapiens protein ( Homo sapiens ...    32   2.0  
BC027971-1|AAH27971.1|  911|Homo sapiens brevican protein.             30   8.2  
BC022938-1|AAH22938.1|  911|Homo sapiens brevican protein.             30   8.2  
BC010571-1|AAH10571.1|  911|Homo sapiens brevican protein.             30   8.2  
BC009117-1|AAH09117.1|  911|Homo sapiens brevican protein.             30   8.2  
AY358372-1|AAQ88738.1|  911|Homo sapiens Brevican Core Pro protein.    30   8.2  
AY007241-1|AAG01897.1|  516|Homo sapiens hyaluronan binding prot...    30   8.2  
AL590666-18|CAI16352.1|  911|Homo sapiens brevican protein.            30   8.2  
AL365181-16|CAI13060.1|  671|Homo sapiens brevican protein.            30   8.2  
AL365181-12|CAI13056.1|  911|Homo sapiens brevican protein.            30   8.2  
AF229053-1|AAG23135.1|  671|Homo sapiens chondroitin sulfate pro...    30   8.2  
AF228710-1|AAG23134.1|  911|Homo sapiens chondroitin sulfate pro...    30   8.2  
AB209570-1|BAD92807.1|  850|Homo sapiens brevican isoform 1 vari...    30   8.2  

>BC010993-1|AAH10993.2|  337|Homo sapiens calcium binding protein
           39-like protein.
          Length = 337

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +3

Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
           +SF+++R DDE  +DE+   +K+++ LK+T
Sbjct: 306 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 335


>AL138875-4|CAI10893.1|  337|Homo sapiens calcium binding protein
           39-like protein.
          Length = 337

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +3

Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
           +SF+++R DDE  +DE+   +K+++ LK+T
Sbjct: 306 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 335


>AL138875-3|CAI10892.1|  280|Homo sapiens calcium binding protein
           39-like protein.
          Length = 280

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +3

Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
           +SF+++R DDE  +DE+   +K+++ LK+T
Sbjct: 249 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 278


>AL136218-3|CAI10816.1|  337|Homo sapiens calcium binding protein
           39-like protein.
          Length = 337

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +3

Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
           +SF+++R DDE  +DE+   +K+++ LK+T
Sbjct: 306 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 335


>AL136218-1|CAI10814.1|  280|Homo sapiens calcium binding protein
           39-like protein.
          Length = 280

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +3

Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
           +SF+++R DDE  +DE+   +K+++ LK+T
Sbjct: 249 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 278


>AK022639-1|BAB14147.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12577 fis, clone NT2RM4001047, highly similar to
           MO25 PROTEIN. ).
          Length = 289

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/30 (40%), Positives = 23/30 (76%)
 Frame = +3

Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
           +SF+++R DDE  +DE+   +K+++ LK+T
Sbjct: 258 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 287


>BC027971-1|AAH27971.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>BC022938-1|AAH22938.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>BC010571-1|AAH10571.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>BC009117-1|AAH09117.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AY358372-1|AAQ88738.1|  911|Homo sapiens Brevican Core Pro protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AY007241-1|AAG01897.1|  516|Homo sapiens hyaluronan binding protein
           protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 423 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 478


>AL590666-18|CAI16352.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AL365181-16|CAI13060.1|  671|Homo sapiens brevican protein.
          Length = 671

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AL365181-12|CAI13056.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AF229053-1|AAG23135.1|  671|Homo sapiens chondroitin sulfate
           proteoglycan BEHAB/brevican protein.
          Length = 671

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AF228710-1|AAG23134.1|  911|Homo sapiens chondroitin sulfate
           proteoglycan BEHAB/brevican protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538


>AB209570-1|BAD92807.1|  850|Homo sapiens brevican isoform 1 variant
           protein.
          Length = 850

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +2

Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
           P +L +  P  S P EP  Q   +   P + +       L +G    +R PR+H P
Sbjct: 422 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 477


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,674,081
Number of Sequences: 237096
Number of extensions: 2126994
Number of successful extensions: 4399
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4399
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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