Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0030
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 37 0.046
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 37 0.046
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 37 0.046
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 37 0.046
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 37 0.046
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 37 0.046
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 35 0.19
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 33 0.57
BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interactin... 33 0.75
BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interactin... 33 0.75
AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associate... 32 1.7
AK124754-1|BAC85937.1| 893|Homo sapiens protein ( Homo sapiens ... 32 1.7
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 30 1.8
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 30 1.8
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 30 1.8
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 30 1.8
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 30 1.9
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 30 1.9
BC060866-1|AAH60866.1| 995|Homo sapiens ankyrin repeat domain 3... 31 3.0
BC041418-1|AAH41418.1| 527|Homo sapiens ANKRD38 protein protein. 31 3.0
AL832644-1|CAD89966.1| 704|Homo sapiens hypothetical protein pr... 31 3.0
AL162739-6|CAI19297.1| 367|Homo sapiens novel protein protein. 31 3.0
AL162739-5|CAI19298.1| 995|Homo sapiens novel protein protein. 31 3.0
AL162739-3|CAI19295.1| 351|Homo sapiens novel protein protein. 31 3.0
AL139343-4|CAI19094.1| 367|Homo sapiens novel protein protein. 31 3.0
AL139343-3|CAI19093.1| 995|Homo sapiens novel protein protein. 31 3.0
AL139343-2|CAI19092.1| 351|Homo sapiens novel protein protein. 31 3.0
AK091941-1|BAC03774.1| 367|Homo sapiens protein ( Homo sapiens ... 31 3.0
AK057403-1|BAB71472.1| 647|Homo sapiens protein ( Homo sapiens ... 31 3.0
AK056459-1|BAB71191.1| 331|Homo sapiens protein ( Homo sapiens ... 31 4.0
AF108461-1|AAF31756.1| 1134|Homo sapiens ubinuclein protein. 31 4.0
AF108460-1|AAF31755.1| 1134|Homo sapiens ubinuclein protein. 31 4.0
AF108459-1|AAF34869.1| 1134|Homo sapiens ubinuclein protein. 31 4.0
BC126396-1|AAI26397.1| 574|Homo sapiens forkhead box J2 protein. 30 5.3
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein. 30 5.3
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein. 30 5.3
AF155133-1|AAK49016.1| 526|Homo sapiens FOXJ2 forkhead factor i... 30 5.3
AF155132-1|AAF65927.1| 574|Homo sapiens FOXJ2 forkhead factor p... 30 5.3
M33308-1|AAA61283.1| 1066|Homo sapiens VCL protein. 30 7.0
BC039174-1|AAH39174.1| 1066|Homo sapiens vinculin protein. 30 7.0
AL731576-5|CAI39673.1| 1066|Homo sapiens vinculin protein. 30 7.0
AL731576-1|CAI39669.1| 806|Homo sapiens vinculin protein. 30 7.0
AL596247-9|CAI13972.1| 1066|Homo sapiens vinculin protein. 30 7.0
AK124266-1|BAC85820.1| 140|Homo sapiens protein ( Homo sapiens ... 30 7.0
S53911-1|AAB25223.1| 328|Homo sapiens CD34 protein. 29 9.2
S53910-1|AAB25222.1| 385|Homo sapiens CD34 protein. 29 9.2
M81945-1|AAA03659.1| 385|Homo sapiens hematopoietic stem cell a... 29 9.2
M81104-1|AAA03181.1| 373|Homo sapiens CD34 protein. 29 9.2
BC057785-1|AAH57785.1| 716|Homo sapiens RSHL1 protein protein. 29 9.2
BC039146-1|AAH39146.2| 385|Homo sapiens CD34 molecule protein. 29 9.2
BC014477-1|AAH14477.1| 328|Homo sapiens homeobox D1 protein. 29 9.2
AL356275-4|CAI40196.1| 328|Homo sapiens CD34 molecule protein. 29 9.2
AL356275-3|CAI40195.1| 385|Homo sapiens CD34 molecule protein. 29 9.2
AK223347-1|BAD97067.1| 717|Homo sapiens radial spokehead-like 1... 29 9.2
AF538601-1|AAN15135.1| 293|Homo sapiens hematopoietic progenita... 29 9.2
AF523361-1|AAM82157.1| 385|Homo sapiens CD34 antigen protein. 29 9.2
AF241528-1|AAG44444.1| 328|Homo sapiens homeobox-containing tra... 29 9.2
AF202118-1|AAG29939.1| 328|Homo sapiens HOX D1 protein protein. 29 9.2
AB238231-1|BAE46748.1| 328|Homo sapiens CD34 antigen protein. 29 9.2
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 37.1 bits (82), Expect = 0.046
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 172 PLPSEALSKTS----ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
P PS S T A LL S T LS P +P AS RD P P
Sbjct: 350 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 409
Query: 340 QFLKSSSALSHTSPPHPHSLKTTGH 414
+ L SS+ S +SPP P K + H
Sbjct: 410 EKLPQSSS-SESSPPSPQPTKVSRH 433
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 37.1 bits (82), Expect = 0.046
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 172 PLPSEALSKTS----ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
P PS S T A LL S T LS P +P AS RD P P
Sbjct: 350 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 409
Query: 340 QFLKSSSALSHTSPPHPHSLKTTGH 414
+ L SS+ S +SPP P K + H
Sbjct: 410 EKLPQSSS-SESSPPSPQPTKVSRH 433
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 37.1 bits (82), Expect = 0.046
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 172 PLPSEALSKTS----ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
P PS S T A LL S T LS P +P AS RD P P
Sbjct: 350 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 409
Query: 340 QFLKSSSALSHTSPPHPHSLKTTGH 414
+ L SS+ S +SPP P K + H
Sbjct: 410 EKLPQSSS-SESSPPSPQPTKVSRH 433
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 37.1 bits (82), Expect = 0.046
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 172 PLPSEALSKTS----ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
P PS S T A LL S T LS P +P AS RD P P
Sbjct: 315 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 374
Query: 340 QFLKSSSALSHTSPPHPHSLKTTGH 414
+ L SS+ S +SPP P K + H
Sbjct: 375 EKLPQSSS-SESSPPSPQPTKVSRH 398
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 37.1 bits (82), Expect = 0.046
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 172 PLPSEALSKTS----ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
P PS S T A LL S T LS P +P AS RD P P
Sbjct: 140 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 199
Query: 340 QFLKSSSALSHTSPPHPHSLKTTGH 414
+ L SS+ S +SPP P K + H
Sbjct: 200 EKLPQSSS-SESSPPSPQPTKVSRH 223
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 37.1 bits (82), Expect = 0.046
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 172 PLPSEALSKTS----ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
P PS S T A LL S T LS P +P AS RD P P
Sbjct: 398 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 457
Query: 340 QFLKSSSALSHTSPPHPHSLKTTGH 414
+ L SS+ S +SPP P K + H
Sbjct: 458 EKLPQSSS-SESSPPSPQPTKVSRH 481
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 35.1 bits (77), Expect = 0.19
Identities = 24/90 (26%), Positives = 39/90 (43%)
Frame = +1
Query: 142 NTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDH 321
NTL +L ++P LSKTS + + + + + A+T S P+SP R
Sbjct: 884 NTLKKLRGLAPSAVPGLSKTSGRRVVSHEVVLGGRLAAKTSFSLSRPSSP-RVEDLKGAA 942
Query: 322 IYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
+Y ++L + L P PH + G
Sbjct: 943 LYSRLREYLLTQDQLKENGYPFPHPERPGG 972
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 33.5 bits (73), Expect = 0.57
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +1
Query: 142 NTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDH 321
NTL +L ++P LSKT + + + + + A+T S P+SP R
Sbjct: 866 NTLKKLRGLAPSAVPGLSKTGGRRVVSHEVVLGGRLAAKTSFSLSRPSSP-RVEDLKGAA 924
Query: 322 IYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
+Y ++L + L P PH + G
Sbjct: 925 LYSRLREYLLTQDQLKENGYPFPHPERPGG 954
>BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 33.1 bits (72), Expect = 0.75
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 169 SPLPSEALSKTSAL--KNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQ 342
SPLP++ L K++ L +N+ T VVL+S P++T H HH Q
Sbjct: 217 SPLPAKGRDPVEILIPKDITDPLSLNTCTDEGHVVLAS----PLKTGRKRHRHRGQHHQQ 272
Query: 343 FLKSSSALSHTSPP 384
+ + SH PP
Sbjct: 273 QQAAGGSESHPVPP 286
>BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 33.1 bits (72), Expect = 0.75
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 169 SPLPSEALSKTSAL--KNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQ 342
SPLP++ L K++ L +N+ T VVL+S P++T H HH Q
Sbjct: 217 SPLPAKGRDPVEILIPKDITDPLSLNTCTDEGHVVLAS----PLKTGRKRHRHRGQHHQQ 272
Query: 343 FLKSSSALSHTSPP 384
+ + SH PP
Sbjct: 273 QQAAGGSESHPVPP 286
>AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associated
antigen SGA-72M protein.
Length = 1780
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/103 (24%), Positives = 47/103 (45%)
Frame = +3
Query: 96 PILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQ 275
P +KQE E +G + + GN S AE + EEP+ ++ + + +
Sbjct: 1298 PYMKQEKEEEKEGFSESDFSDGNTSSNAESWRNPSSSEEEPSPVLKTLERSAARKMPSKS 1357
Query: 276 LSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 404
L I++++ Q + + PE + R+ ++T P QP+N
Sbjct: 1358 LEDISSDSSNQAKVDNQ------PEELVRSAEDVSTVPTQPDN 1394
>AK124754-1|BAC85937.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ42764 fis, clone BRAWH3002821, moderately
similar to Mus musculus synaptotagmin-like 2 (Sytl2). ).
Length = 893
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/103 (24%), Positives = 47/103 (45%)
Frame = +3
Query: 96 PILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQ 275
P +KQE E +G + + GN S AE + EEP+ ++ + + +
Sbjct: 411 PYMKQEKEEEKEGFSESDFSDGNTSSNAESWRNPSSSEEEPSPVLKTLERSAARKMPSKS 470
Query: 276 LSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 404
L I++++ Q + + PE + R+ ++T P QP+N
Sbjct: 471 LEDISSDSSNQAKVDNQ------PEELVRSAEDVSTVPTQPDN 507
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 29.9 bits (64), Expect(2) = 1.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP P + ++ A PP P+NN+P
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 20.6 bits (41), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 QGSHLPTPPPIP 347
Q S PTPPP P
Sbjct: 212 QPSPGPTPPPFP 223
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 29.9 bits (64), Expect(2) = 1.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP P + ++ A PP P+NN+P
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 20.6 bits (41), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 QGSHLPTPPPIP 347
Q S PTPPP P
Sbjct: 212 QPSPGPTPPPFP 223
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 29.9 bits (64), Expect(2) = 1.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP P + ++ A PP P+NN+P
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 20.6 bits (41), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 QGSHLPTPPPIP 347
Q S PTPPP P
Sbjct: 212 QPSPGPTPPPFP 223
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 29.9 bits (64), Expect(2) = 1.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP P + ++ A PP P+NN+P
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 20.6 bits (41), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 QGSHLPTPPPIP 347
Q S PTPPP P
Sbjct: 212 QPSPGPTPPPFP 223
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 29.9 bits (64), Expect(2) = 1.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP P + ++ A PP P+NN+P
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 20.6 bits (41), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 QGSHLPTPPPIP 347
Q S PTPPP P
Sbjct: 212 QPSPGPTPPPFP 223
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 29.9 bits (64), Expect(2) = 1.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP P + ++ A PP P+NN+P
Sbjct: 73 PPPPPPPVGNRPSIHREAVPPPPPQNNKP 101
Score = 20.6 bits (41), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 QGSHLPTPPPIP 347
Q S PTPPP P
Sbjct: 21 QPSPGPTPPPFP 32
>BC060866-1|AAH60866.1| 995|Homo sapiens ankyrin repeat domain 38
protein.
Length = 995
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 759 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 814
>BC041418-1|AAH41418.1| 527|Homo sapiens ANKRD38 protein protein.
Length = 527
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 291 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 346
>AL832644-1|CAD89966.1| 704|Homo sapiens hypothetical protein
protein.
Length = 704
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 468 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 523
>AL162739-6|CAI19297.1| 367|Homo sapiens novel protein protein.
Length = 367
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 131 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 186
>AL162739-5|CAI19298.1| 995|Homo sapiens novel protein protein.
Length = 995
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 759 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 814
>AL162739-3|CAI19295.1| 351|Homo sapiens novel protein protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 115 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 170
>AL139343-4|CAI19094.1| 367|Homo sapiens novel protein protein.
Length = 367
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 131 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 186
>AL139343-3|CAI19093.1| 995|Homo sapiens novel protein protein.
Length = 995
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 759 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 814
>AL139343-2|CAI19092.1| 351|Homo sapiens novel protein protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 115 SQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHE-VQPHSPHFLK 170
>AK091941-1|BAC03774.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ34622 fis, clone KIDNE2014978, weakly similar to
NG28. ).
Length = 367
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLK 351
S+ L +T + L R +N+ +Q V S +SP AS L + + PH P FLK
Sbjct: 131 SQHLPETGTTTDQLLRQSLNTISQEWFHVSSRKSSSPAVVASYLHE-VQPHSPHFLK 186
>AK057403-1|BAB71472.1| 647|Homo sapiens protein ( Homo sapiens
cDNA FLJ32841 fis, clone TESTI2003325. ).
Length = 647
Score = 31.1 bits (67), Expect = 3.0
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +3
Query: 63 VAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPA-LQVE-G 236
V P SP P P SS +P G G + AL ++GAEEPA + +E G
Sbjct: 515 VCRPSSPPSPRP-----SSGDPSRVKAGHKHVGTGRANLFPAALVHLGAEEPAGVYLEPG 569
Query: 237 QFQYP-SEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQP 398
++ S + ++ + P S LP P P P+ + A A PP+P
Sbjct: 570 LLEHAISPSAADVLVARYMSRAAGSP--SPLPAPDPAPK-SEPAAEEGALVPPEP 621
>AK056459-1|BAB71191.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ31897 fis, clone NT2RP7004080, weakly similar to
CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
Length = 331
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 159 GNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQLSY-IANENGFQPQGSHLP-T 332
G+ E+ + EE + + + QF + S + ++ Y +A E+ +G+H P
Sbjct: 122 GDEAPTLEKVLTPELSEEEVSTRDDIQFHHFSSEEALQKVKYFVAKEDPSSQEGAHTPEA 181
Query: 333 PPPIPEVIQRAL 368
PPP P +R L
Sbjct: 182 PPPQPPSSERCL 193
>AF108461-1|AAF31756.1| 1134|Homo sapiens ubinuclein protein.
Length = 1134
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 280 PTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVN 429
P++P T+ L H SSSALSH P PHS+ + G +Y N
Sbjct: 856 PSAPA-TSGGLSASSSSSHKTPASSSSALSH--PAKPHSVSSAGSSYKNN 902
>AF108460-1|AAF31755.1| 1134|Homo sapiens ubinuclein protein.
Length = 1134
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 280 PTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVN 429
P++P T+ L H SSSALSH P PHS+ + G +Y N
Sbjct: 856 PSAPA-TSGGLSASSSSSHKTPASSSSALSH--PAKPHSVSSAGSSYKNN 902
>AF108459-1|AAF34869.1| 1134|Homo sapiens ubinuclein protein.
Length = 1134
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 280 PTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVN 429
P++P T+ L H SSSALSH P PHS+ + G +Y N
Sbjct: 856 PSAPA-TSGGLSASSSSSHKTPASSSSALSH--PAKPHSVSSAGSSYKNN 902
>BC126396-1|AAI26397.1| 574|Homo sapiens forkhead box J2 protein.
Length = 574
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 69 APQSPTEPIPIL-KQESSIEPDGSYQYSYET 158
+P SPT+P L K E+++ DG +YSY T
Sbjct: 43 SPGSPTDPNATLSKDEAAVHQDGKPRYSYAT 73
>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
Length = 1192
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +3
Query: 237 QFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 404
Q+QY + S N P+ +P PPP+P Q L PP P +
Sbjct: 50 QYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNH 105
>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
Length = 1374
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +3
Query: 237 QFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 404
Q+QY + S N P+ +P PPP+P Q L PP P +
Sbjct: 50 QYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNH 105
>AF155133-1|AAK49016.1| 526|Homo sapiens FOXJ2 forkhead factor
isoform FOXJ2.S protein.
Length = 526
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 69 APQSPTEPIPIL-KQESSIEPDGSYQYSYET 158
+P SPT+P L K E+++ DG +YSY T
Sbjct: 43 SPGSPTDPNATLSKDEAAVHQDGKPRYSYAT 73
>AF155132-1|AAF65927.1| 574|Homo sapiens FOXJ2 forkhead factor
protein.
Length = 574
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 69 APQSPTEPIPIL-KQESSIEPDGSYQYSYET 158
+P SPT+P L K E+++ DG +YSY T
Sbjct: 43 SPGSPTDPNATLSKDEAAVHQDGKPRYSYAT 73
>M33308-1|AAA61283.1| 1066|Homo sapiens VCL protein.
Length = 1066
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 DGGTIQLSYIAN-ENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
D G L +A FQPQ P PPP E ++ PP PE P
Sbjct: 819 DSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVP 871
>BC039174-1|AAH39174.1| 1066|Homo sapiens vinculin protein.
Length = 1066
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 DGGTIQLSYIAN-ENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
D G L +A FQPQ P PPP E ++ PP PE P
Sbjct: 819 DSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVP 871
>AL731576-5|CAI39673.1| 1066|Homo sapiens vinculin protein.
Length = 1066
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 DGGTIQLSYIAN-ENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
D G L +A FQPQ P PPP E ++ PP PE P
Sbjct: 819 DSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVP 871
>AL731576-1|CAI39669.1| 806|Homo sapiens vinculin protein.
Length = 806
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 DGGTIQLSYIAN-ENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
D G L +A FQPQ P PPP E ++ PP PE P
Sbjct: 491 DSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVP 543
>AL596247-9|CAI13972.1| 1066|Homo sapiens vinculin protein.
Length = 1066
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 DGGTIQLSYIAN-ENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
D G L +A FQPQ P PPP E ++ PP PE P
Sbjct: 819 DSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVP 871
>AK124266-1|BAC85820.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ42272 fis, clone TKIDN2016309. ).
Length = 140
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 210 EEPALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHLPTP 335
E AL++ FQ SE G T + YI++++ PQ PTP
Sbjct: 94 ERMALRLGFCFQPSSERGSTYRKQYISHQSLRDPQAQLTPTP 135
>S53911-1|AAB25223.1| 328|Homo sapiens CD34 protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>S53910-1|AAB25222.1| 385|Homo sapiens CD34 protein.
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>M81945-1|AAA03659.1| 385|Homo sapiens hematopoietic stem cell
antigen protein.
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>M81104-1|AAA03181.1| 373|Homo sapiens CD34 protein.
Length = 373
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 95 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 150
>BC057785-1|AAH57785.1| 716|Homo sapiens RSHL1 protein protein.
Length = 716
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 276 LSYIANENGFQPQGSHLPTPPPIPEVIQRALAYL 377
L ++ +E GF + +P P P+ +Q A AYL
Sbjct: 172 LQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYL 205
>BC039146-1|AAH39146.2| 385|Homo sapiens CD34 molecule protein.
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>BC014477-1|AAH14477.1| 328|Homo sapiens homeobox D1 protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 66 AAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQ 245
AAP P+ P P Q + +G +YE G +AA GA PA G
Sbjct: 67 AAPARPSVPPPAAPQYAQCTLEG----AYEPGAAPAAAAGGADYGFLGSGPAYDFPGVLG 122
Query: 246 YPSEDGGT 269
++DGG+
Sbjct: 123 RAADDGGS 130
>AL356275-4|CAI40196.1| 328|Homo sapiens CD34 molecule protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>AL356275-3|CAI40195.1| 385|Homo sapiens CD34 molecule protein.
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>AK223347-1|BAD97067.1| 717|Homo sapiens radial spokehead-like 1
variant protein.
Length = 717
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 276 LSYIANENGFQPQGSHLPTPPPIPEVIQRALAYL 377
L ++ +E GF + +P P P+ +Q A AYL
Sbjct: 173 LQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYL 206
>AF538601-1|AAN15135.1| 293|Homo sapiens hematopoietic progenital
cell antigen CD34 precursor protein.
Length = 293
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 76 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 131
>AF523361-1|AAM82157.1| 385|Homo sapiens CD34 antigen protein.
Length = 385
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
>AF241528-1|AAG44444.1| 328|Homo sapiens homeobox-containing
transcripton factor HOXD1 protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 66 AAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQ 245
AAP P+ P P Q + +G +YE G +AA GA PA G
Sbjct: 67 AAPARPSVPPPAAPQYAQCTLEG----AYEPGAAPAAAAGGADYGFLGSGPAYDFPGVLG 122
Query: 246 YPSEDGGT 269
++DGG+
Sbjct: 123 RAADDGGS 130
>AF202118-1|AAG29939.1| 328|Homo sapiens HOX D1 protein protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 66 AAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQ 245
AAP P+ P P Q + +G +YE G +AA GA PA G
Sbjct: 67 AAPARPSVPPPAAPQYAQCTLEG----AYEPGAAPAAAAGGADYGFLGSGPAYDFPGVLG 122
Query: 246 YPSEDGGT 269
++DGG+
Sbjct: 123 RAADDGGS 130
>AB238231-1|BAE46748.1| 328|Homo sapiens CD34 antigen protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.2
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 238 NSSTQARTVVLSSCPTSPMRTA---SSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
NSS Q++T V+S+ T+P + ++L+ + P + L ++S TSP P++
Sbjct: 107 NSSVQSQTSVISTVFTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYT 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,107,434
Number of Sequences: 237096
Number of extensions: 2217967
Number of successful extensions: 7927
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 6989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7876
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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