Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B01
         (909 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.                  31   7.6  
BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein pr...    31   7.6  
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.     31   7.6  

>M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.
          Length = 573

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
 Frame = +3

Query: 492 SVTPKTKPARKSPGSLPPCWKTXXFTSRSCXPRTNST*SSITRKVLVMTVSSIVIAPLTX 671
           + TP T PA  S  +LPP       T+ +  P   +T S  T   +    S+  + P T 
Sbjct: 162 TTTPITPPA--STTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 219

Query: 672 X---PHSYLEP----SXYXATSCFXSPPTVPXCXXPXXKIGRPPNXXPXGPXETSXP 821
               P +   P    +    T+   SPPT+     P      PP      P  T+ P
Sbjct: 220 PSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTP 276


>BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein
           protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +1

Query: 250 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 429
           SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 45  SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101

Query: 430 KQKGPS-RPQVDRPTKPQQN 486
           K  G S +PQ +   +  +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121


>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
          Length = 1685

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +1

Query: 250  SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 429
            SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177

Query: 430  KQKGPS-RPQVDRPTKPQQN 486
            K  G S +PQ +   +  +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,229,182
Number of Sequences: 237096
Number of extensions: 2429825
Number of successful extensions: 6250
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6127
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)