Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40031
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003656-1|AAO39660.1|  677|Drosophila melanogaster AT01533p pro...    32   0.48 
AE014134-1991|AAF53037.2|  677|Drosophila melanogaster CG33129-P...    32   0.48 
AF166000-1|AAD47830.1|  561|Drosophila melanogaster sodium-depen...    29   2.6  
AE014134-141|AAF51466.1|  563|Drosophila melanogaster CG3159-PA,...    29   2.6  
U05980-1|AAC46474.1|  148|Drosophila melanogaster PBPRP-1 protein.     29   4.5  
AE014296-2133|AAF49925.1|  148|Drosophila melanogaster CG10436-P...    29   4.5  

>BT003656-1|AAO39660.1|  677|Drosophila melanogaster AT01533p
           protein.
          Length = 677

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = -2

Query: 360 FPQLSITVTTSMSFGKDAAAT*LMIRLFSSSAPNFCKRNKLSSGMVRPLYIHRHVLLLSR 181
           F  L  +++T ++  +  A   L+++L   + PN C RN   + ++R  Y +R  + LS 
Sbjct: 192 FYSLLDSMSTDLNNNQTVAGYKLILQLIGQNWPNICSRNLAKTALLRNSYQNRSNICLSI 251

Query: 180 L 178
           L
Sbjct: 252 L 252


>AE014134-1991|AAF53037.2|  677|Drosophila melanogaster CG33129-PE,
           isoform E protein.
          Length = 677

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = -2

Query: 360 FPQLSITVTTSMSFGKDAAAT*LMIRLFSSSAPNFCKRNKLSSGMVRPLYIHRHVLLLSR 181
           F  L  +++T ++  +  A   L+++L   + PN C RN   + ++R  Y +R  + LS 
Sbjct: 192 FYSLLDSMSTDLNNNQTVAGYKLILQLIGQNWPNICSRNLAKTALLRNSYQNRSNICLSI 251

Query: 180 L 178
           L
Sbjct: 252 L 252


>AF166000-1|AAD47830.1|  561|Drosophila melanogaster
           sodium-dependent excitatory aminoacid transporter 2
           protein.
          Length = 561

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 233 LEWFVLSIFTGTYYFYRVFTQAVFIQTLLNQDFQFFSHL 117
           L WF++++  G + +  V  QA++   +    F+F++ L
Sbjct: 300 LMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGL 338


>AE014134-141|AAF51466.1|  563|Drosophila melanogaster CG3159-PA,
           isoform A protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 233 LEWFVLSIFTGTYYFYRVFTQAVFIQTLLNQDFQFFSHL 117
           L WF++++  G + +  V  QA++   +    F+F++ L
Sbjct: 300 LMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGL 338


>U05980-1|AAC46474.1|  148|Drosophila melanogaster PBPRP-1 protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +2

Query: 260 FGALDENNRIISQVAAASFPKDI--DVVTVIESCGKEDGNTPVDQVFKYFKCF 412
           FG +D  N +  +      P++I   +  ++ SCG + G    D  ++  KC+
Sbjct: 79  FGLIDSQNIMHLEALLEVLPEEIYKTINGLVSSCGTQKGKDGCDTAYETVKCY 131


>AE014296-2133|AAF49925.1|  148|Drosophila melanogaster CG10436-PA
           protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +2

Query: 260 FGALDENNRIISQVAAASFPKDID--VVTVIESCGKEDGNTPVDQVFKYFKCF 412
           FG +D  N +  +      P++I   +  ++ SCG + G    D  ++  KC+
Sbjct: 79  FGLIDSQNIMHLEALLEVLPEEIHKTINGLVSSCGTQKGKDGCDTAYETVKCY 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,405,677
Number of Sequences: 53049
Number of extensions: 452788
Number of successful extensions: 1242
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)