Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30031
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029953-1|ABM92827.1|  104|Drosophila melanogaster IP17351p pro...   100   7e-22
AE014134-1388|AAF52596.2|  104|Drosophila melanogaster CG7424-PA...   100   7e-22
BT024261-1|ABC86323.1|  121|Drosophila melanogaster IP15820p pro...    83   9e-17
AY047519-1|AAK77251.1|  466|Drosophila melanogaster GH02741p pro...    27   6.3  
AE013599-3250|AAM70929.1|  466|Drosophila melanogaster CG9865-PB...    27   6.3  
AE013599-3249|AAM70928.1|  466|Drosophila melanogaster CG9865-PA...    27   6.3  

>BT029953-1|ABM92827.1|  104|Drosophila melanogaster IP17351p
           protein.
          Length = 104

 Score =  100 bits (239), Expect = 7e-22
 Identities = 47/76 (61%), Positives = 52/76 (68%)
 Frame = +2

Query: 23  MVNVPKQRRTYXXXXXXXXXXXXTQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 202
           MVNVPKQRRT+            TQYKKSKER  AQGRRRYDRKQQG+GGQ+KPIF    
Sbjct: 1   MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKA 60

Query: 203 XXXXXIVLRLECADCK 250
                IVLR+EC +CK
Sbjct: 61  KTTKKIVLRMECTECK 76



 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 259 QVALKRCKHFELGGDKKRKGQMIQF 333
           Q  LKRCKHFELGGDKKRKGQMIQF
Sbjct: 80  QTPLKRCKHFELGGDKKRKGQMIQF 104


>AE014134-1388|AAF52596.2|  104|Drosophila melanogaster CG7424-PA
           protein.
          Length = 104

 Score =  100 bits (239), Expect = 7e-22
 Identities = 47/76 (61%), Positives = 52/76 (68%)
 Frame = +2

Query: 23  MVNVPKQRRTYXXXXXXXXXXXXTQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 202
           MVNVPKQRRT+            TQYKKSKER  AQGRRRYDRKQQG+GGQ+KPIF    
Sbjct: 1   MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKA 60

Query: 203 XXXXXIVLRLECADCK 250
                IVLR+EC +CK
Sbjct: 61  KTTKKIVLRMECTECK 76



 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 259 QVALKRCKHFELGGDKKRKGQMIQF 333
           Q  LKRCKHFELGGDKKRKGQMIQF
Sbjct: 80  QTPLKRCKHFELGGDKKRKGQMIQF 104


>BT024261-1|ABC86323.1|  121|Drosophila melanogaster IP15820p
           protein.
          Length = 121

 Score = 83.4 bits (197), Expect = 9e-17
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = +2

Query: 92  TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCK 250
           TQYKKSKER  AQGRRRYDRKQQG+GGQ+KPIF         IVLR+EC +CK
Sbjct: 41  TQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECK 93



 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 259 QVALKRCKHFELGGDKKRKGQMIQF 333
           Q  LKRCKHFELGGDKKRKGQMIQF
Sbjct: 97  QTPLKRCKHFELGGDKKRKGQMIQF 121


>AY047519-1|AAK77251.1|  466|Drosophila melanogaster GH02741p
           protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 162 PCCLRS*RLLPWAACLSLDFLYCVTLCTLWHLHFLQYVLRCFGTFTIFEFV 10
           P CL + ++L W  C  L FL+ +    LW L    Y+L  F T+  F ++
Sbjct: 385 PLCLNNFKMLSWRRCFGLLFLWLLAQ-ALWLLP--AYLLE-FHTWNTFYWI 431


>AE013599-3250|AAM70929.1|  466|Drosophila melanogaster CG9865-PB,
           isoform B protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 162 PCCLRS*RLLPWAACLSLDFLYCVTLCTLWHLHFLQYVLRCFGTFTIFEFV 10
           P CL + ++L W  C  L FL+ +    LW L    Y+L  F T+  F ++
Sbjct: 385 PLCLNNFKMLSWRRCFGLLFLWLLAQ-ALWLLP--AYLLE-FHTWNTFYWI 431


>AE013599-3249|AAM70928.1|  466|Drosophila melanogaster CG9865-PA,
           isoform A protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 162 PCCLRS*RLLPWAACLSLDFLYCVTLCTLWHLHFLQYVLRCFGTFTIFEFV 10
           P CL + ++L W  C  L FL+ +    LW L    Y+L  F T+  F ++
Sbjct: 385 PLCLNNFKMLSWRRCFGLLFLWLLAQ-ALWLLP--AYLLE-FHTWNTFYWI 431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,704,077
Number of Sequences: 53049
Number of extensions: 327478
Number of successful extensions: 1343
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)