Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10417
         (839 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075331-1|AAL68198.1|  330|Drosophila melanogaster GH11935p pro...    30   3.4  
AE014134-1455|AAF52636.2|  330|Drosophila melanogaster CG7830-PA...    30   3.4  

>AY075331-1|AAL68198.1|  330|Drosophila melanogaster GH11935p
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 834 DITS*LAHPPNHEAEVSVVSVYCIRSSRSYCNLNKFEFLH 715
           DIT  +  PPN+   V+++++  +  S  Y   N  EFL+
Sbjct: 172 DITIRIFRPPNYSGTVAMITLVALVGSFLYIRRNNLEFLY 211


>AE014134-1455|AAF52636.2|  330|Drosophila melanogaster CG7830-PA
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 834 DITS*LAHPPNHEAEVSVVSVYCIRSSRSYCNLNKFEFLH 715
           DIT  +  PPN+   V+++++  +  S  Y   N  EFL+
Sbjct: 172 DITIRIFRPPNYSGTVAMITLVALVGSFLYIRRNNLEFLY 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,782,050
Number of Sequences: 53049
Number of extensions: 601584
Number of successful extensions: 972
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)