Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10401
(768 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 224 9e-59
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 224 9e-59
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 224 9e-59
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 224 9e-59
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 224 9e-59
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 105 5e-23
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 105 5e-23
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 40 0.004
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 40 0.004
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 35 0.11
X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine deca... 30 3.0
AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA... 30 3.0
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 224 bits (548), Expect = 9e-59
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +
Sbjct: 661 IKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAI 720
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRLMEPVYLCEIQCPEVAVGGI V F ++ + + YL ++
Sbjct: 721 TAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVV--KAYLPVNE 778
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKG
Sbjct: 779 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKG 829
Score = 162 bits (393), Expect = 5e-40
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEARKIW
Sbjct: 577 CLSKSPNKHNRLLMKALPMPDGLPEDIDNGEVSAKDEFKARARYLSEKYDYDVTEARKIW 636
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN ++DC+K VQYLNE++
Sbjct: 637 CFGPDGTGPNFILDCTKSVQYLNEIK 662
Score = 103 bits (247), Expect = 3e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 796
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p protein.
Length = 844
Score = 224 bits (548), Expect = 9e-59
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +
Sbjct: 661 IKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAI 720
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRLMEPVYLCEIQCPEVAVGGI V F ++ + + YL ++
Sbjct: 721 TAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVV--KAYLPVNE 778
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKG
Sbjct: 779 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKG 829
Score = 161 bits (391), Expect = 1e-39
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEARKIW
Sbjct: 577 CLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIW 636
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN ++DC+K VQYLNE++
Sbjct: 637 CFGPDGTGPNFILDCTKSVQYLNEIK 662
Score = 103 bits (247), Expect = 3e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 796
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 224 bits (548), Expect = 9e-59
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +
Sbjct: 649 IKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAI 708
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRLMEPVYLCEIQCPEVAVGGI V F ++ + + YL ++
Sbjct: 709 TAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVV--KAYLPVNE 766
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKG
Sbjct: 767 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKG 817
Score = 161 bits (391), Expect = 1e-39
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEARKIW
Sbjct: 565 CLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIW 624
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN ++DC+K VQYLNE++
Sbjct: 625 CFGPDGTGPNFILDCTKSVQYLNEIK 650
Score = 103 bits (247), Expect = 3e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 731 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 784
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 224 bits (548), Expect = 9e-59
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +
Sbjct: 649 IKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAI 708
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRLMEPVYLCEIQCPEVAVGGI V F ++ + + YL ++
Sbjct: 709 TAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVV--KAYLPVNE 766
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKG
Sbjct: 767 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKG 817
Score = 161 bits (391), Expect = 1e-39
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEARKIW
Sbjct: 565 CLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIW 624
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN ++DC+K VQYLNE++
Sbjct: 625 CFGPDGTGPNFILDCTKSVQYLNEIK 650
Score = 103 bits (247), Expect = 3e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 731 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 784
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 224 bits (548), Expect = 9e-59
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +
Sbjct: 661 IKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAI 720
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRLMEPVYLCEIQCPEVAVGGI V F ++ + + YL ++
Sbjct: 721 TAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVV--KAYLPVNE 778
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKG
Sbjct: 779 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKG 829
Score = 161 bits (391), Expect = 1e-39
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEARKIW
Sbjct: 577 CLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIW 636
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN ++DC+K VQYLNE++
Sbjct: 637 CFGPDGTGPNFILDCTKSVQYLNEIK 662
Score = 103 bits (247), Expect = 3e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 796
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p protein.
Length = 975
Score = 105 bits (253), Expect = 5e-23
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
+KDS+V GFQW +EG + EE +R V+F I D + +A+HRGGGQIIPT RR Y+ L
Sbjct: 765 VKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFL 824
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
A PRLMEP E+Q P V + TV +P + ++ ++
Sbjct: 825 MATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTI--KAFIPAID 882
Query: 611 SVLLPICVPTPAD-KAFPQCVFDHWQVLPGDPCE 709
S + T +AF VF HWQ++PGDP +
Sbjct: 883 SFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 916
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
C +++PNK N++ M ++P+ GL EDI+ G V + K + Y++D+ AR IW
Sbjct: 677 CFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIW 736
Query: 183 CFGPEGTGPNILVD 224
FGP+ TGPNILVD
Sbjct: 737 AFGPDSTGPNILVD 750
Score = 59.7 bits (138), Expect = 4e-09
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = +1
Query: 514 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQ 651
VL RRRGHV +++ V+G+P++ +KA++P +SFGF DLR++T GQ
Sbjct: 852 VLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQ 897
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 105 bits (253), Expect = 5e-23
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
+KDS+V GFQW +EG + EE +R V+F I D + +A+HRGGGQIIPT RR Y+ L
Sbjct: 765 VKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFL 824
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
A PRLMEP E+Q P V + TV +P + ++ ++
Sbjct: 825 MATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTI--KAFIPAID 882
Query: 611 SVLLPICVPTPAD-KAFPQCVFDHWQVLPGDPCE 709
S + T +AF VF HWQ++PGDP +
Sbjct: 883 SFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 916
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
C +++PNK N++ M ++P+ GL EDI+ G V + K + Y++D+ AR IW
Sbjct: 677 CFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIW 736
Query: 183 CFGPEGTGPNILVD 224
FGP+ TGPNILVD
Sbjct: 737 AFGPDSTGPNILVD 750
Score = 59.7 bits (138), Expect = 4e-09
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = +1
Query: 514 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQ 651
VL RRRGHV +++ V+G+P++ +KA++P +SFGF DLR++T GQ
Sbjct: 852 VLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQ 897
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p
protein.
Length = 949
Score = 39.9 bits (89), Expect = 0.004
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G + V+ RR G + G+ F V LPV ESF F ++R T G P
Sbjct: 826 GKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQTSGLACP 879
Score = 35.5 bits (78), Expect = 0.081
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 263 SVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRCLYAC 427
S+V GFQ + G + EE ++GV F + + ++ + D RG GQ++ +
Sbjct: 742 SLVNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQA 801
Query: 428 LLTAQPRLMEPVYLCEI 478
RL+ P+Y C I
Sbjct: 802 FQNQPQRLVTPMYSCNI 818
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 39.9 bits (89), Expect = 0.004
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G + V+ RR G + G+ F V LPV ESF F ++R T G P
Sbjct: 910 GKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQTSGLACP 963
Score = 35.5 bits (78), Expect = 0.081
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 263 SVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRCLYAC 427
S+V GFQ + G + EE ++GV F + + ++ + D RG GQ++ +
Sbjct: 826 SLVNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQA 885
Query: 428 LLTAQPRLMEPVYLCEI 478
RL+ P+Y C I
Sbjct: 886 FQNQPQRLVTPMYSCNI 902
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 511 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQG 654
G L++R G + G F V A +P+N+ FG+ +LRS+T G+G
Sbjct: 660 GHLSKRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAGELRSSTQGKG 705
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/91 (20%), Positives = 40/91 (43%)
Frame = +2
Query: 236 SSVPQ*IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRC 415
++VP+ V G++ A++G+++ L G+RF + D H + +
Sbjct: 570 TNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQDGGHH--IVDSSELAFMLAAHGA 627
Query: 416 LYACLLTAQPRLMEPVYLCEIQCPEVAVGGI 508
+ +++EP+ L E+ PE G +
Sbjct: 628 IKEVFQNGSWQILEPIMLVEVTAPEEFQGAV 658
>X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine
decarboxylase protein.
Length = 847
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +2
Query: 275 GFQWAAKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 442
GF WA+ E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 443 PRLME 457
R ++
Sbjct: 162 TRAIQ 166
>AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA
protein.
Length = 847
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +2
Query: 275 GFQWAAKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 442
GF WA+ E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 443 PRLME 457
R ++
Sbjct: 162 TRAIQ 166
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,656,919
Number of Sequences: 53049
Number of extensions: 1013721
Number of successful extensions: 2969
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2968
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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