Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30104
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p pro...    31   1.1  
AY119224-1|AAM51084.1|  469|Drosophila melanogaster SD16903p pro...    31   1.1  
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    31   1.1  
AL109630-12|CAB65877.1|  558|Drosophila melanogaster EG:BACR7A4....    29   4.6  
AE014298-135|AAF45574.3|  558|Drosophila melanogaster CG3690-PA ...    29   4.6  

>BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p
           protein.
          Length = 739

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 525 DERRRHGGGNCHKGCWRNARGSGCGAGAAWSTSAG 421
           D+RRR  GG  H+  W ++R  G G G + ++  G
Sbjct: 386 DDRRRDYGGQRHESRWSDSRRGGGGGGYSSNSGGG 420


>AY119224-1|AAM51084.1|  469|Drosophila melanogaster SD16903p
           protein.
          Length = 469

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 525 DERRRHGGGNCHKGCWRNARGSGCGAGAAWSTSAG 421
           D+RRR  GG  H+  W ++R  G G G + ++  G
Sbjct: 116 DDRRRDYGGQRHESRWSDSRRGGGGGGYSSNSGGG 150


>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
            protein.
          Length = 1271

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 525  DERRRHGGGNCHKGCWRNARGSGCGAGAAWSTSAG 421
            D+RRR  GG  H+  W ++R  G G G + ++  G
Sbjct: 919  DDRRRDYGGQRHESRWSDSRRGGGGGGYSSNSGGG 953


>AL109630-12|CAB65877.1|  558|Drosophila melanogaster EG:BACR7A4.13
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 462 SGCGAGAAWSTSAGCTEAECSSL--LRSLLWTMRIAIIVPLFPT 337
           +GC  G  WS+SA  T A  S    + S+  T  I+  V LFPT
Sbjct: 452 AGCSIGMYWSSSAASTVALASLFVTMGSISATSVISASVSLFPT 495


>AE014298-135|AAF45574.3|  558|Drosophila melanogaster CG3690-PA
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 462 SGCGAGAAWSTSAGCTEAECSSL--LRSLLWTMRIAIIVPLFPT 337
           +GC  G  WS+SA  T A  S    + S+  T  I+  V LFPT
Sbjct: 452 AGCSIGMYWSSSAASTVALASLFVTMGSISATSVISASVSLFPT 495


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,321,594
Number of Sequences: 53049
Number of extensions: 572685
Number of successful extensions: 1754
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1737
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)