Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30091
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...    82   8e-16
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...    82   8e-16
AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p pro...    29   6.2  
AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17...    29   6.2  
AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA...    29   6.2  
BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p pro...    29   8.3  
AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA...    29   8.3  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 39/83 (46%), Positives = 52/83 (62%)
 Frame = +1

Query: 16  RRRTIRXPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSI 195
           RRR +      ++ +GPDKFSFPSGHASRA  +         + IIF  P+ AW VSV+I
Sbjct: 94  RRRPVAS--KDMLTIGPDKFSFPSGHASRAFFVLLFFAKLYPLHIIFLMPVTAWAVSVAI 151

Query: 196 SRVLAERHYLLDSIGGVGIGFLK 264
           SR++ +RHY+LD   G  IG L+
Sbjct: 152 SRLILQRHYILDICAGAAIGVLE 174


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 39/83 (46%), Positives = 52/83 (62%)
 Frame = +1

Query: 16  RRRTIRXPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSI 195
           RRR +      ++ +GPDKFSFPSGHASRA  +         + IIF  P+ AW VSV+I
Sbjct: 94  RRRPVAS--KDMLTIGPDKFSFPSGHASRAFFVLLFFAKLYPLHIIFLMPVTAWAVSVAI 151

Query: 196 SRVLAERHYLLDSIGGVGIGFLK 264
           SR++ +RHY+LD   G  IG L+
Sbjct: 152 SRLILQRHYILDICAGAAIGVLE 174


>AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p
           protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 256 IQYPHLLCCPVDSDVQP 206
           + YPHLL CPV S++ P
Sbjct: 195 LNYPHLLSCPVPSELPP 211


>AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17.3
           protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 256 IQYPHLLCCPVDSDVQP 206
           + YPHLL CPV S++ P
Sbjct: 195 LNYPHLLSCPVPSELPP 211


>AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA
           protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 256 IQYPHLLCCPVDSDVQP 206
           + YPHLL CPV S++ P
Sbjct: 195 LNYPHLLSCPVPSELPP 211


>BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p
           protein.
          Length = 141

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = +1

Query: 88  GHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISRVL 207
           GHA+RA+++  I+I    V+I+    L+A +V+  ++R+L
Sbjct: 16  GHAARAIVLIVIIILLVVVAILRIIVLVAVIVATILARLL 55


>AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
 Frame = +1

Query: 16  RRRTIRXPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPL-------MA 174
           R   +    N  +EV PD+F  P  +      I  + +Y D V ++ YP         M 
Sbjct: 15  RTNAVFPVQNCFVEVLPDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRTGSTWAQEMV 74

Query: 175 WVVSVSISRVLAERHYLLDS 234
           W++   +  V AE+   L S
Sbjct: 75  WLLGHQLDYVAAEQDLRLRS 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,714,948
Number of Sequences: 53049
Number of extensions: 581147
Number of successful extensions: 1156
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)