Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30090
         (801 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3191|AAF46716.3|  789|Drosophila melanogaster CG15666-P...    31   1.4  
AY268066-1|AAQ56702.1|  617|Drosophila melanogaster UDP-GalNAc:p...    29   5.6  
AY060338-1|AAL25377.1|  536|Drosophila melanogaster GH23657p pro...    29   5.6  
AE014134-880|AAF52218.2|  630|Drosophila melanogaster CG31651-PA...    29   5.6  
AE014134-879|ABI31292.1|  630|Drosophila melanogaster CG31651-PB...    29   5.6  

>AE013599-3191|AAF46716.3|  789|Drosophila melanogaster CG15666-PA
           protein.
          Length = 789

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 451 LEHREQSMLRKMVIH-ERLWTSKKILRKQLEKWSWSQPE 338
           + H  Q  +RK  +  E LW   K L++QL++ S S+P+
Sbjct: 667 VHHETQQSIRKQTVQLEELWQQFKTLQRQLQEQSESEPK 705


>AY268066-1|AAQ56702.1|  617|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 617

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 333 RISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNI 431
           R  GC + H++S     SI ++ HN +W T+ R +
Sbjct: 160 RHEGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTV 194


>AY060338-1|AAL25377.1|  536|Drosophila melanogaster GH23657p
           protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 333 RISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNI 431
           R  GC + H++S     SI ++ HN +W T+ R +
Sbjct: 79  RHEGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTV 113


>AE014134-880|AAF52218.2|  630|Drosophila melanogaster CG31651-PA,
           isoform A protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 333 RISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNI 431
           R  GC + H++S     SI ++ HN +W T+ R +
Sbjct: 173 RHEGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTV 207


>AE014134-879|ABI31292.1|  630|Drosophila melanogaster CG31651-PB,
           isoform B protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 333 RISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNI 431
           R  GC + H++S     SI ++ HN +W T+ R +
Sbjct: 173 RHEGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTV 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,610,741
Number of Sequences: 53049
Number of extensions: 678926
Number of successful extensions: 1947
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)