Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30068
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001703-1|AAN71458.1|  236|Drosophila melanogaster RE64040p pro...    71   1e-12
AY061437-1|AAL28985.1|  236|Drosophila melanogaster LD36516p pro...    71   1e-12
AE013599-861|AAF58939.2|  236|Drosophila melanogaster CG8806-PA ...    71   1e-12
U30502-1|AAA75044.1|  752|Drosophila melanogaster Drosophila N-e...    29   4.5  
U28836-1|AAC46844.1|  744|Drosophila melanogaster N-ethylmaleimi...    29   4.5  
BT023784-1|AAZ41793.1|  752|Drosophila melanogaster LD09622p pro...    29   4.5  
AE014297-1767|AAF54995.2|  752|Drosophila melanogaster CG33101-P...    29   4.5  
AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB...    29   5.9  
AY069058-1|AAL39203.1|  245|Drosophila melanogaster GH07085p pro...    28   7.8  
AE014134-2130|AAF53144.1|  245|Drosophila melanogaster CG6746-PA...    28   7.8  

>BT001703-1|AAN71458.1|  236|Drosophila melanogaster RE64040p
           protein.
          Length = 236

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +1

Query: 82  GQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMYP 231
           G T+A R A+I SQVFGFSRAIRAFGI+RFK N ++ ++GFN+VL  M+P
Sbjct: 119 GSTLAVRRAYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFP 168



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 6   TYTRNLGYTKVMSVVERVEYRYGRPG 83
           T+TRNLG TK+M V E V Y   + G
Sbjct: 94  TFTRNLGMTKIMKVDEIVVYSEQKDG 119


>AY061437-1|AAL28985.1|  236|Drosophila melanogaster LD36516p
           protein.
          Length = 236

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +1

Query: 82  GQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMYP 231
           G T+A R A+I SQVFGFSRAIRAFGI+RFK N ++ ++GFN+VL  M+P
Sbjct: 119 GSTLAVRRAYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFP 168



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 6   TYTRNLGYTKVMSVVERVEYRYGRPG 83
           T+TRNLG TK+M V E V Y   + G
Sbjct: 94  TFTRNLGMTKIMKVDEIVVYSEQKDG 119


>AE013599-861|AAF58939.2|  236|Drosophila melanogaster CG8806-PA
           protein.
          Length = 236

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +1

Query: 82  GQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMYP 231
           G T+A R A+I SQVFGFSRAIRAFGI+RFK N ++ ++GFN+VL  M+P
Sbjct: 119 GSTLAVRRAYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFP 168



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 6   TYTRNLGYTKVMSVVERVEYRYGRPG 83
           T+TRNLG TK+M++ E V Y   + G
Sbjct: 94  TFTRNLGMTKIMAIDEIVVYSEQKDG 119


>U30502-1|AAA75044.1|  752|Drosophila melanogaster Drosophila
           N-ethylmaleimide-sensitivefusion protein 2 protein.
          Length = 752

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 18  NLGYTKVMSVVERVEYRYGRPGPDRGQAFGVDRLAGFRLLASHTGIRHRQVQEELLADGE 197
           N     V    E V+Y    PGP     F +++++G  L   H G    Q +   L+  +
Sbjct: 23  NKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRKWATLSINQ 82

Query: 198 RVQPRP 215
            +  RP
Sbjct: 83  EIDVRP 88


>U28836-1|AAC46844.1|  744|Drosophila melanogaster N-ethylmaleimide
           sensitive fusionprotein-2 protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 18  NLGYTKVMSVVERVEYRYGRPGPDRGQAFGVDRLAGFRLLASHTGIRHRQVQEELLADGE 197
           N     V    E V+Y    PGP     F +++++G  L   H G    Q +   L+  +
Sbjct: 15  NKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRKWATLSINQ 74

Query: 198 RVQPRP 215
            +  RP
Sbjct: 75  EIDVRP 80


>BT023784-1|AAZ41793.1|  752|Drosophila melanogaster LD09622p
           protein.
          Length = 752

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 18  NLGYTKVMSVVERVEYRYGRPGPDRGQAFGVDRLAGFRLLASHTGIRHRQVQEELLADGE 197
           N     V    E V+Y    PGP     F +++++G  L   H G    Q +   L+  +
Sbjct: 23  NKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRKWATLSINQ 82

Query: 198 RVQPRP 215
            +  RP
Sbjct: 83  EIDVRP 88


>AE014297-1767|AAF54995.2|  752|Drosophila melanogaster CG33101-PA
           protein.
          Length = 752

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 18  NLGYTKVMSVVERVEYRYGRPGPDRGQAFGVDRLAGFRLLASHTGIRHRQVQEELLADGE 197
           N     V    E V+Y    PGP     F +++++G  L   H G    Q +   L+  +
Sbjct: 23  NKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRKWATLSINQ 82

Query: 198 RVQPRP 215
            +  RP
Sbjct: 83  EIDVRP 88


>AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB,
           isoform B protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 149 RMAREKPKTCESI---HAERLATVWPGPAVPVLNSLNYTHHFS 30
           +M  +K +T ES+   H +R A V PG  +P L  +  T+H S
Sbjct: 179 QMQNKKTQTPESVLKSHKQRSANVNPGDRIPKLALVRRTNHHS 221


>AY069058-1|AAL39203.1|  245|Drosophila melanogaster GH07085p
           protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 448 MEIVNIICESLLNFTTTTFVVC*MLMIDGFLLCLWPAAMY 567
           + IV ++   ++    TTF+V   + + G LLC W A  Y
Sbjct: 142 LNIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSY 181


>AE014134-2130|AAF53144.1|  245|Drosophila melanogaster CG6746-PA
           protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 448 MEIVNIICESLLNFTTTTFVVC*MLMIDGFLLCLWPAAMY 567
           + IV ++   ++    TTF+V   + + G LLC W A  Y
Sbjct: 142 LNIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSY 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,815,772
Number of Sequences: 53049
Number of extensions: 518524
Number of successful extensions: 1618
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)