Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00013
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p pro...    31   2.3  
AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-P...    31   2.3  
AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-l...    29   5.2  
AF277386-1|AAG17395.1| 3127|Drosophila melanogaster dystrophin-l...    29   5.2  
AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-P...    29   5.2  
AE014297-2670|AAF55675.2| 3127|Drosophila melanogaster CG34157-P...    29   5.2  
AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-P...    29   5.2  
AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-P...    29   5.2  
AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-P...    29   5.2  

>AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p
           protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 503 VVRTKSKKLPYYLLCGDY-DKGKDLPPSG*YYSVDRRSECCCSELVYTKAYLEHVVSE 673
           V RT++   P     G   DK  +  PS    S ++ ++CCC+       Y  H VSE
Sbjct: 499 VNRTQAASAPNLSKAGPKKDKNSNKVPSSFKPSKEKSTKCCCTRFDPNNQYYPHYVSE 556


>AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-PA,
           isoform A protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 503 VVRTKSKKLPYYLLCGDY-DKGKDLPPSG*YYSVDRRSECCCSELVYTKAYLEHVVSE 673
           V RT++   P     G   DK  +  PS    S ++ ++CCC+       Y  H VSE
Sbjct: 499 VNRTQAASAPNLSKAGPKKDKNSNKVPSSFKPSKEKSTKCCCTRFDPNNQYYPHYVSE 556


>AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-like
            protein DLP2 protein.
          Length = 3497

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1158 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1192


>AF277386-1|AAG17395.1| 3127|Drosophila melanogaster dystrophin-like
            protein DYS protein.
          Length = 3127

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1158 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1192


>AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-PG,
            isoform G protein.
          Length = 3504

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1165 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1199


>AE014297-2670|AAF55675.2| 3127|Drosophila melanogaster CG34157-PC,
            isoform C protein.
          Length = 3127

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1158 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1192


>AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-PA,
            isoform A protein.
          Length = 3497

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1158 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1192


>AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-PH,
            isoform H protein.
          Length = 3598

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1158 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1192


>AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-PF,
            isoform F protein.
          Length = 3529

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 626  SELVYTK-AYLEHVVSEIRAYVKYLVCYDGYPPQL 727
            +ELVY K A LEH+ +++  + K++V   GY  +L
Sbjct: 1190 TELVYAKTALLEHISTQLGEFKKFMVSETGYLDKL 1224


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,890,723
Number of Sequences: 53049
Number of extensions: 638560
Number of successful extensions: 1565
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)