Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0063
         (486 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24242-1|AAA65111.1|  173|Drosophila melanogaster L71-3 protein.       28   7.8  
AY069753-1|AAL39898.2|  179|Drosophila melanogaster LP11175p pro...    28   7.8  
AE014296-2555|AAF49599.1|  173|Drosophila melanogaster CG7608-PA...    28   7.8  

>U24242-1|AAA65111.1|  173|Drosophila melanogaster L71-3 protein.
          Length = 173

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = -3

Query: 466 RKTKNTVRTASYNIKRPSRRHFPTSEPRQRTASRXLEDRGATTRSEAQR 320
           R T+ T  T      R SRR      P  RT  R    R  TTR+  +R
Sbjct: 121 RTTRRTPTTRRAPTTRSSRRTTRRRAPTTRTTRRTTRRRAPTTRTTTRR 169


>AY069753-1|AAL39898.2|  179|Drosophila melanogaster LP11175p
           protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = -3

Query: 466 RKTKNTVRTASYNIKRPSRRHFPTSEPRQRTASRXLEDRGATTRSEAQR 320
           R T+ T  T      R SRR      P  RT  R    R  TTR+  +R
Sbjct: 127 RTTRRTPTTRRAPTTRSSRRTTRRRAPTTRTTRRTTRRRAPTTRTTTRR 175


>AE014296-2555|AAF49599.1|  173|Drosophila melanogaster CG7608-PA
           protein.
          Length = 173

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = -3

Query: 466 RKTKNTVRTASYNIKRPSRRHFPTSEPRQRTASRXLEDRGATTRSEAQR 320
           R T+ T  T      R SRR      P  RT  R    R  TTR+  +R
Sbjct: 121 RTTRRTPTTRRAPTTRSSRRTTRRRAPTTRTTRRTTRRRAPTTRTTTRR 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,739,099
Number of Sequences: 53049
Number of extensions: 372229
Number of successful extensions: 1339
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)