SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0047
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089264-1|AAL90002.1|  580|Drosophila melanogaster AT05239p pro...    37   0.022
AE014298-2321|AAF48559.2|  580|Drosophila melanogaster CG12698-P...    37   0.029
X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin...    31   1.4  
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA...    31   1.4  
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB...    31   1.4  
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC...    31   1.4  
BT003544-1|AAO39548.1|  717|Drosophila melanogaster RE05051p pro...    29   5.8  
AF145598-1|AAD38573.1|  717|Drosophila melanogaster BcDNA.GH0228...    29   5.8  
AE013599-2199|AAO41379.1|  717|Drosophila melanogaster CG8433-PB...    29   5.8  
AE013599-2198|AAF58055.2|  717|Drosophila melanogaster CG8433-PA...    29   5.8  

>AY089264-1|AAL90002.1|  580|Drosophila melanogaster AT05239p
           protein.
          Length = 580

 Score = 37.1 bits (82), Expect = 0.022
 Identities = 26/82 (31%), Positives = 44/82 (53%)
 Frame = +1

Query: 238 KKVSRKCLFRALGRLVMANAHWLIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKA 417
           KK++ K  F+ L R V+ N  WL E  E      NVK+ V  AM  + +K  ++++ +K+
Sbjct: 14  KKIA-KIRFKKLVRSVILNMQWLSELPEEGGISLNVKKNV--AMLRQKRKVGMMTMAEKS 70

Query: 418 LLNKPANERTEQEKNTYIELLA 483
           LL  P  +R+  E+     ++A
Sbjct: 71  LLRTPHAKRSVDERKKLCTIVA 92


>AE014298-2321|AAF48559.2|  580|Drosophila melanogaster CG12698-PA
           protein.
          Length = 580

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 26/82 (31%), Positives = 44/82 (53%)
 Frame = +1

Query: 238 KKVSRKCLFRALGRLVMANAHWLIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKA 417
           KK++ K  F+ L R V+ N  WL E  E      NVK+ V  AM  + +K  ++++ +K+
Sbjct: 14  KKIA-KIRFKKLIRSVILNMQWLSELPEEGGISLNVKKNV--AMLRQKRKVGMMTMAEKS 70

Query: 418 LLNKPANERTEQEKNTYIELLA 483
           LL  P  +R+  E+     ++A
Sbjct: 71  LLRTPHAKRSVDERKKLCTIVA 92


>X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin
           protein.
          Length = 1645

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 DSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLN 426
           D ENY G E V+RR Q+ M    K +QLL + +   LN
Sbjct: 473 DRENYHGKERVRRREQEVM---AKWRQLLELLENQRLN 507


>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
           isoform A protein.
          Length = 4097

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 DSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLN 426
           D ENY G E V+RR Q+ M    K +QLL + +   LN
Sbjct: 460 DRENYHGKERVRRREQEVM---AKWRQLLELLENQRLN 494


>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
           isoform B protein.
          Length = 4118

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 DSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLN 426
           D ENY G E V+RR Q+ M    K +QLL + +   LN
Sbjct: 460 DRENYHGKERVRRREQEVM---AKWRQLLELLENQRLN 494


>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
           isoform C protein.
          Length = 4207

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 DSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLN 426
           D ENY G E V+RR Q+ M    K +QLL + +   LN
Sbjct: 460 DRENYHGKERVRRREQEVM---AKWRQLLELLENQRLN 494


>BT003544-1|AAO39548.1|  717|Drosophila melanogaster RE05051p
           protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 428 NPPTNEQNRRKIHISNYWRLEMF*ALSNHVKKKLAAVTYF-KYYG--PCRTI 574
           NPP     R+K         EM  A  NH++++ A +  F K YG  P RT+
Sbjct: 640 NPPIKVTPRKKFKCPECTNTEMLSADLNHMRERSACIDRFSKIYGRMPLRTV 691


>AF145598-1|AAD38573.1|  717|Drosophila melanogaster BcDNA.GH02288
           protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 428 NPPTNEQNRRKIHISNYWRLEMF*ALSNHVKKKLAAVTYF-KYYG--PCRTI 574
           NPP     R+K         EM  A  NH++++ A +  F K YG  P RT+
Sbjct: 640 NPPIKVTPRKKFKCPECTNTEMLSADLNHMRERSACIDRFSKIYGRMPLRTV 691


>AE013599-2199|AAO41379.1|  717|Drosophila melanogaster CG8433-PB,
           isoform B protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 428 NPPTNEQNRRKIHISNYWRLEMF*ALSNHVKKKLAAVTYF-KYYG--PCRTI 574
           NPP     R+K         EM  A  NH++++ A +  F K YG  P RT+
Sbjct: 640 NPPIKVTPRKKFKCPECTNTEMLSADLNHMRERSACIDRFSKIYGRMPLRTV 691


>AE013599-2198|AAF58055.2|  717|Drosophila melanogaster CG8433-PA,
           isoform A protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 428 NPPTNEQNRRKIHISNYWRLEMF*ALSNHVKKKLAAVTYF-KYYG--PCRTI 574
           NPP     R+K         EM  A  NH++++ A +  F K YG  P RT+
Sbjct: 640 NPPIKVTPRKKFKCPECTNTEMLSADLNHMRERSACIDRFSKIYGRMPLRTV 691


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,851,809
Number of Sequences: 53049
Number of extensions: 490491
Number of successful extensions: 1013
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -