Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0026.Seq
         (830 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p pro...    50   4e-06
AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-P...    50   4e-06
AY069463-1|AAL39608.1|  779|Drosophila melanogaster LD18949p pro...    31   1.5  
AE014134-741|AAF51010.1| 1008|Drosophila melanogaster CG15439-PA...    31   1.5  

>AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p
           protein.
          Length = 302

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 21/66 (31%)
 Frame = +1

Query: 277 VETGTASE--VDYDWLPKEIVNQLKKSP---KTPK----------------QSPRARKAK 393
           +ETGTA++  +DYDW+P+E +  L+KSP   KTPK                QSP+ RK K
Sbjct: 237 IETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVK 296

Query: 394 RSAGDD 411
           RSAGDD
Sbjct: 297 RSAGDD 302



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 113 YNQTLNIVEVSEGLDGETFFLYV 181
           +N+T+ I EV EGLDGETFFLYV
Sbjct: 182 FNETVLISEVDEGLDGETFFLYV 204


>AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-PA
           protein.
          Length = 302

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 21/66 (31%)
 Frame = +1

Query: 277 VETGTASE--VDYDWLPKEIVNQLKKSP---KTPK----------------QSPRARKAK 393
           +ETGTA++  +DYDW+P+E +  L+KSP   KTPK                QSP+ RK K
Sbjct: 237 IETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVK 296

Query: 394 RSAGDD 411
           RSAGDD
Sbjct: 297 RSAGDD 302



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 113 YNQTLNIVEVSEGLDGETFFLYV 181
           +N+T+ I EV EGLDGETFFLYV
Sbjct: 182 FNETVLISEVDEGLDGETFFLYV 204


>AY069463-1|AAL39608.1|  779|Drosophila melanogaster LD18949p
           protein.
          Length = 779

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 256 PRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQS-PRARKAK 393
           P+ V +P ET  ++ V+    PK  V+  K SP+ P+   PR   AK
Sbjct: 668 PQKVREPKETAASASVNPTPSPKRKVSPRKASPRKPRVGRPRVSNAK 714


>AE014134-741|AAF51010.1| 1008|Drosophila melanogaster CG15439-PA
            protein.
          Length = 1008

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 256  PRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQS-PRARKAK 393
            P+ V +P ET  ++ V+    PK  V+  K SP+ P+   PR   AK
Sbjct: 897  PQKVREPKETAASASVNPTPSPKRKVSPRKASPRKPRVGRPRVSNAK 943


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,271,780
Number of Sequences: 53049
Number of extensions: 613195
Number of successful extensions: 1618
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)