Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0034
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118366-1|AAM48395.1| 2118|Drosophila melanogaster RE10379p pro...    29   4.6  
AL022018-1|CAA17682.1| 2118|Drosophila melanogaster EG:8D8.1 pro...    29   4.6  
AE014298-177|AAF45603.1| 2118|Drosophila melanogaster CG11411-PA...    29   4.6  
AE014296-123|AAN11448.1|  581|Drosophila melanogaster CG17129-PC...    29   4.6  
AE014296-122|AAN11447.1|  581|Drosophila melanogaster CG17129-PB...    29   4.6  
AE014296-121|AAF47402.2|  581|Drosophila melanogaster CG17129-PA...    29   4.6  

>AY118366-1|AAM48395.1| 2118|Drosophila melanogaster RE10379p
           protein.
          Length = 2118

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 262 EVSRAILRLDQDCQDLEVSQAIRHHGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLD 441
           E+ +A+    Q+ + L++   ++  GS  ++         + LG T QEAN    H    
Sbjct: 87  EIQQAVAHQGQNQEVLQLEALLKARGSSKESTAQVSTSRQEVLGATVQEANVVESHSTSQ 146

Query: 442 CQDLEVSQ 465
             DLE  Q
Sbjct: 147 TVDLEQLQ 154


>AL022018-1|CAA17682.1| 2118|Drosophila melanogaster EG:8D8.1
           protein.
          Length = 2118

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 262 EVSRAILRLDQDCQDLEVSQAIRHHGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLD 441
           E+ +A+    Q+ + L++   ++  GS  ++         + LG T QEAN    H    
Sbjct: 87  EIQQAVAHQGQNQEVLQLEALLKARGSSKESTAQVSTSRQEVLGATVQEANVVESHSTSQ 146

Query: 442 CQDLEVSQ 465
             DLE  Q
Sbjct: 147 TVDLEQLQ 154


>AE014298-177|AAF45603.1| 2118|Drosophila melanogaster CG11411-PA
           protein.
          Length = 2118

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 262 EVSRAILRLDQDCQDLEVSQAIRHHGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLD 441
           E+ +A+    Q+ + L++   ++  GS  ++         + LG T QEAN    H    
Sbjct: 87  EIQQAVAHQGQNQEVLQLEALLKARGSSKESTAQVSTSRQEVLGATVQEANVVESHSTSQ 146

Query: 442 CQDLEVSQ 465
             DLE  Q
Sbjct: 147 TVDLEQLQ 154


>AE014296-123|AAN11448.1|  581|Drosophila melanogaster CG17129-PC,
           isoform C protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 107 CQDLEVSRAILHQYRDYQGLEVSRAIPHQDLGYQDL*ANQAILHQYRD 250
           C D EV ++++ ++RD + L+V   IP+  L   D    +  L  Y D
Sbjct: 48  CSDEEVEKSVV-RFRDMETLDVESVIPNSSLMVLDDELGEITLQDYAD 94


>AE014296-122|AAN11447.1|  581|Drosophila melanogaster CG17129-PB,
           isoform B protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 107 CQDLEVSRAILHQYRDYQGLEVSRAIPHQDLGYQDL*ANQAILHQYRD 250
           C D EV ++++ ++RD + L+V   IP+  L   D    +  L  Y D
Sbjct: 48  CSDEEVEKSVV-RFRDMETLDVESVIPNSSLMVLDDELGEITLQDYAD 94


>AE014296-121|AAF47402.2|  581|Drosophila melanogaster CG17129-PA,
           isoform A protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 107 CQDLEVSRAILHQYRDYQGLEVSRAIPHQDLGYQDL*ANQAILHQYRD 250
           C D EV ++++ ++RD + L+V   IP+  L   D    +  L  Y D
Sbjct: 48  CSDEEVEKSVV-RFRDMETLDVESVIPNSSLMVLDDELGEITLQDYAD 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,020,307
Number of Sequences: 53049
Number of extensions: 478716
Number of successful extensions: 1297
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)