Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0023X.Seq
         (452 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc fi...    28   5.1  
BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p pro...    28   5.1  
AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p pro...    28   5.1  
AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA ...    28   5.1  
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy...    27   8.9  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    27   8.9  

>U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc
           finger pair-rule proteinprotein.
          Length = 609

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 248 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 138
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 248 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 138
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 248 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 138
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 248 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 138
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
            chain protein.
          Length = 4559

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 414  RLNGRYWMWTRSLRSRWKSSPWMTA 340
            RL G  ++WT +L+SR ++S W  A
Sbjct: 4527 RLRGPTFVWTFNLKSRERASKWTLA 4551


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 384 RSLRSRWKSSPWMTASAHRATSETTWASTHRRP 286
           R+ R R K++ W T    RAT  TT  +T RRP
Sbjct: 82  RTKRPRRKTTKWTTK---RATKRTTKRTTRRRP 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,423,947
Number of Sequences: 53049
Number of extensions: 301205
Number of successful extensions: 778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)