Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C09f
         (315 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003259-1|AAO25016.1|  295|Drosophila melanogaster LD24265p pro...    54   5e-08
AE013599-1780|AAF58327.1|  295|Drosophila melanogaster CG6543-PB...    54   5e-08
AE013599-1779|AAF58326.1|  295|Drosophila melanogaster CG6543-PA...    54   5e-08
AY052009-1|AAK93433.1|  385|Drosophila melanogaster LD47223p pro...    28   2.2  
AE014297-2024|AAF55181.2|  385|Drosophila melanogaster CG5044-PA...    28   2.2  
AE014297-2023|AAN13658.2|  386|Drosophila melanogaster CG5044-PB...    28   2.2  

>BT003259-1|AAO25016.1|  295|Drosophila melanogaster LD24265p
           protein.
          Length = 295

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
 Frame = +1

Query: 172 QASIKFYSTAS---YENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFXEL 315
           Q + +F S+++   +E IK EV G  KNVG+I LNRPKALNALC  L  EL
Sbjct: 24  QVATRFSSSSTNNNWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKEL 74


>AE013599-1780|AAF58327.1|  295|Drosophila melanogaster CG6543-PB,
           isoform B protein.
          Length = 295

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
 Frame = +1

Query: 172 QASIKFYSTAS---YENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFXEL 315
           Q + +F S+++   +E IK EV G  KNVG+I LNRPKALNALC  L  EL
Sbjct: 24  QVATRFSSSSTNNNWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKEL 74


>AE013599-1779|AAF58326.1|  295|Drosophila melanogaster CG6543-PA,
           isoform A protein.
          Length = 295

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
 Frame = +1

Query: 172 QASIKFYSTAS---YENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFXEL 315
           Q + +F S+++   +E IK EV G  KNVG+I LNRPKALNALC  L  EL
Sbjct: 24  QVATRFSSSSTNNNWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKEL 74


>AY052009-1|AAK93433.1|  385|Drosophila melanogaster LD47223p
           protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 244 NVGLIQLNRPKALNAL 291
           N G+I LNRPKALNA+
Sbjct: 53  NKGMIILNRPKALNAI 68


>AE014297-2024|AAF55181.2|  385|Drosophila melanogaster CG5044-PA,
           isoform A protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 244 NVGLIQLNRPKALNAL 291
           N G+I LNRPKALNA+
Sbjct: 53  NKGMIILNRPKALNAI 68


>AE014297-2023|AAN13658.2|  386|Drosophila melanogaster CG5044-PB,
           isoform B protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 244 NVGLIQLNRPKALNAL 291
           N G+I LNRPKALNA+
Sbjct: 54  NKGMIILNRPKALNAI 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,066,744
Number of Sequences: 53049
Number of extensions: 257752
Number of successful extensions: 602
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)