Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301B06f
         (418 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071335-1|AAL48957.1|  424|Drosophila melanogaster RE36967p pro...    28   4.3  
AF444795-1|AAM11543.1|  424|Drosophila melanogaster Dorsocross3 ...    28   4.3  
AE014296-1568|AAF50331.1|  424|Drosophila melanogaster CG5093-PA...    28   4.3  
AE014297-3330|AAF56138.2|  481|Drosophila melanogaster CG17382-P...    27   7.6  

>AY071335-1|AAL48957.1|  424|Drosophila melanogaster RE36967p
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 287 PEVKHSXTIGQPFPKWAITPP 225
           P ++++  IG  +P WA TPP
Sbjct: 319 PAIEYARHIGGAYPSWAYTPP 339


>AF444795-1|AAM11543.1|  424|Drosophila melanogaster Dorsocross3
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 287 PEVKHSXTIGQPFPKWAITPP 225
           P ++++  IG  +P WA TPP
Sbjct: 319 PAIEYARHIGGAYPSWAYTPP 339


>AE014296-1568|AAF50331.1|  424|Drosophila melanogaster CG5093-PA
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 287 PEVKHSXTIGQPFPKWAITPP 225
           P ++++  IG  +P WA TPP
Sbjct: 319 PAIEYARHIGGAYPSWAYTPP 339


>AE014297-3330|AAF56138.2|  481|Drosophila melanogaster CG17382-PA
           protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 223 QGGVIAHFGKGWPIVXLCFTSGQLLRL--HTMIHSNINSNEDIINRLPRAFTARDKL 387
           +G +I    + + +V LC +S QLL L     +H+ I S +D++    + F  R +L
Sbjct: 255 RGRLIGMASRIFALVMLCSSSAQLLSLLMSPPLHTRIKSFDDLLTSGLKIFGIRSEL 311


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,114,143
Number of Sequences: 53049
Number of extensions: 333963
Number of successful extensions: 447
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)