Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30041
         (346 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ...    27   6.5  
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,...    27   6.5  
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,...    27   6.5  
AE013599-302|AAF59293.1|  328|Drosophila melanogaster CG12835-PA...    27   6.5  
AY094701-1|AAM11054.1|  217|Drosophila melanogaster GH10729p pro...    27   8.7  
AE014297-2734|AAF55720.1|  573|Drosophila melanogaster CG4462-PA...    27   8.7  

>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
           protein.
          Length = 2422

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 63  GITSCNKSQTRKITICVITGGRTSCESARVGTTALPISAV 182
           G +S + S     T   +  G +S + A    TALP+SAV
Sbjct: 863 GSSSSSGSVATSTTTTTVASGGSSQQVATASATALPVSAV 902


>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
           isoform D protein.
          Length = 2431

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 63  GITSCNKSQTRKITICVITGGRTSCESARVGTTALPISAV 182
           G +S + S     T   +  G +S + A    TALP+SAV
Sbjct: 872 GSSSSSGSVATSTTTTTVASGGSSQQVATASATALPVSAV 911


>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
           isoform C protein.
          Length = 2410

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 63  GITSCNKSQTRKITICVITGGRTSCESARVGTTALPISAV 182
           G +S + S     T   +  G +S + A    TALP+SAV
Sbjct: 851 GSSSSSGSVATSTTTTTVASGGSSQQVATASATALPVSAV 890


>AE013599-302|AAF59293.1|  328|Drosophila melanogaster CG12835-PA
           protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 51  FHGEGITSCNKSQTRKITICVITGGRTSCESARV 152
           FH  GI SCN      + + ++TG  T  + AR+
Sbjct: 212 FHSSGI-SCNGETDDDVEVAMLTGSLTPSQIARI 244


>AY094701-1|AAM11054.1|  217|Drosophila melanogaster GH10729p
           protein.
          Length = 217

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 197 FGLKGGVAVVTILRP*TYISRWVAHLRSNVYGLQ*PFNTR-WAVRSSTN 340
           F + GG+    +L P   +S  V HL       Q P N   W V S  N
Sbjct: 165 FSILGGICTSLLLTPRLSVSPVVPHLEQRNTKEQSPLNAPVWTVESDVN 213


>AE014297-2734|AAF55720.1|  573|Drosophila melanogaster CG4462-PA
           protein.
          Length = 573

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 197 FGLKGGVAVVTILRP*TYISRWVAHLRSNVYGLQ*PFNTR-WAVRSSTN 340
           F + GG+    +L P   +S  V HL       Q P N   W V S  N
Sbjct: 521 FSILGGICTSLLLTPRLSVSPVVPHLEQRNTKEQSPLNAPVWTVESDVN 569


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,227,349
Number of Sequences: 53049
Number of extensions: 347646
Number of successful extensions: 624
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)