Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30023
(527 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061579-1|AAL29127.1| 613|Drosophila melanogaster SD02991p pro... 51 1e-06
AF247763-1|AAF74194.1| 613|Drosophila melanogaster SCAR protein. 51 1e-06
AE014134-2001|AAF53042.1| 613|Drosophila melanogaster CG4636-PA... 51 1e-06
BT025187-1|ABF02289.1| 472|Drosophila melanogaster IP15591p pro... 49 5e-06
BT023826-1|AAZ86747.1| 534|Drosophila melanogaster RE59757p pro... 49 5e-06
AE014297-2610|AAF55617.2| 534|Drosophila melanogaster CG31043-P... 49 5e-06
AE014297-2609|AAZ52530.1| 1044|Drosophila melanogaster CG31043-P... 49 5e-06
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P... 49 5e-06
BT001613-1|AAN71368.1| 496|Drosophila melanogaster RE33426p pro... 29 3.0
AF223353-1|AAL14871.1| 496|Drosophila melanogaster nucleolar KK... 29 3.0
AE014297-3151|AAF55992.2| 496|Drosophila melanogaster CG13849-P... 29 3.0
AY075195-1|AAL68064.1| 753|Drosophila melanogaster AT13606p pro... 29 5.2
AE014297-164|AAF52083.2| 753|Drosophila melanogaster CG14660-PA... 29 5.2
>AY061579-1|AAL29127.1| 613|Drosophila melanogaster SD02991p
protein.
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +3
Query: 309 MPFVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQLASLVLLAEDIFSE 488
MP R++EP +++R+ + + ++ EL+ VTN TLTN ++QL+SL AED+F E
Sbjct: 1 MPLPKRSIEPVHVARSVYQQD----ELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGE 56
Query: 489 LTEQLQEI 512
L + I
Sbjct: 57 LARDVGNI 64
>AF247763-1|AAF74194.1| 613|Drosophila melanogaster SCAR protein.
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +3
Query: 309 MPFVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQLASLVLLAEDIFSE 488
MP R++EP +++R+ + + ++ EL+ VTN TLTN ++QL+SL AED+F E
Sbjct: 1 MPLPKRSIEPVHVARSVYQQD----ELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGE 56
Query: 489 LTEQLQEI 512
L + I
Sbjct: 57 LARDVGNI 64
>AE014134-2001|AAF53042.1| 613|Drosophila melanogaster CG4636-PA
protein.
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +3
Query: 309 MPFVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQLASLVLLAEDIFSE 488
MP R++EP +++R+ + + ++ EL+ VTN TLTN ++QL+SL AED+F E
Sbjct: 1 MPLPKRSIEPVHVARSVYQQD----ELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGE 56
Query: 489 LTEQLQEI 512
L + I
Sbjct: 57 LARDVGNI 64
>BT025187-1|ABF02289.1| 472|Drosophila melanogaster IP15591p
protein.
Length = 472
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
++ E +++N TL+NAL+QLASLVL+A DIF +L LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175
>BT023826-1|AAZ86747.1| 534|Drosophila melanogaster RE59757p
protein.
Length = 534
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
++ E +++N TL+NAL+QLASLVL+A DIF +L LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175
>AE014297-2610|AAF55617.2| 534|Drosophila melanogaster CG31043-PB,
isoform B protein.
Length = 534
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
++ E +++N TL+NAL+QLASLVL+A DIF +L LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175
>AE014297-2609|AAZ52530.1| 1044|Drosophila melanogaster CG31043-PC,
isoform C protein.
Length = 1044
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
++ E +++N TL+NAL+QLASLVL+A DIF +L LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175
>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
isoform A protein.
Length = 1788
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
++ E +++N TL+NAL+QLASLVL+A DIF +L LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175
>BT001613-1|AAN71368.1| 496|Drosophila melanogaster RE33426p
protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = +3
Query: 135 HVLSKTRVLVKVHRSGCRLIQSGGYLTFFVIMC*MDVGITFNFAVREWVNEYFGTNIEMP 314
H S+ +V VHRS +IQS L DV TF+ +REW + +F P
Sbjct: 151 HSYSRAKVKFNVHRSDNMIIQSIALLD----QLDKDVN-TFSMRIREWYSYHF------P 199
Query: 315 FVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQ 446
+ + V Y+ + + + + ++L+ + + +A Q
Sbjct: 200 ELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243
>AF223353-1|AAL14871.1| 496|Drosophila melanogaster nucleolar KKE/D
repeat protein protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = +3
Query: 135 HVLSKTRVLVKVHRSGCRLIQSGGYLTFFVIMC*MDVGITFNFAVREWVNEYFGTNIEMP 314
H S+ +V VHRS +IQS L DV TF+ +REW + +F P
Sbjct: 151 HSYSRAKVKFNVHRSDNMIIQSIALLD----QLDKDVN-TFSMRIREWYSYHF------P 199
Query: 315 FVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQ 446
+ + V Y+ + + + + ++L+ + + +A Q
Sbjct: 200 ELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243
>AE014297-3151|AAF55992.2| 496|Drosophila melanogaster CG13849-PA
protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = +3
Query: 135 HVLSKTRVLVKVHRSGCRLIQSGGYLTFFVIMC*MDVGITFNFAVREWVNEYFGTNIEMP 314
H S+ +V VHRS +IQS L DV TF+ +REW + +F P
Sbjct: 151 HSYSRAKVKFNVHRSDNMIIQSIALLD----QLDKDVN-TFSMRIREWYSYHF------P 199
Query: 315 FVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQ 446
+ + V Y+ + + + + ++L+ + + +A Q
Sbjct: 200 ELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243
>AY075195-1|AAL68064.1| 753|Drosophila melanogaster AT13606p
protein.
Length = 753
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 254 CNSHIHSTHYHKKRQVTATLN*PTS*PVN 168
C H H HYH++R V T + P+N
Sbjct: 325 CTRHRHHPHYHRQRSVPKTYQDRGNSPIN 353
>AE014297-164|AAF52083.2| 753|Drosophila melanogaster CG14660-PA
protein.
Length = 753
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 254 CNSHIHSTHYHKKRQVTATLN*PTS*PVN 168
C H H HYH++R V T + P+N
Sbjct: 325 CTRHRHHPHYHRQRSVPKTYQDRGNSPIN 353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,222,776
Number of Sequences: 53049
Number of extensions: 457801
Number of successful extensions: 1261
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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