Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00019
         (405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   124   6e-29
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   124   6e-29
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   124   6e-29
AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin pr...    27   9.5  
AE013599-3433|AAF46878.2|  147|Drosophila melanogaster CG30196-P...    27   9.5  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  124 bits (298), Expect = 6e-29
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +1

Query: 1   GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
           GRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  
Sbjct: 48  GRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQH 107

Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
           P  +KT++RA+WGKVTR HGN+G+V
Sbjct: 108 PE-RKTRVRAVWGKVTRIHGNTGAV 131



 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +3

Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
           RA+F  NLP  AMGHRIR+MLYPSRI
Sbjct: 132 RARFNRNLPGHAMGHRIRIMLYPSRI 157


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  124 bits (298), Expect = 6e-29
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +1

Query: 1   GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
           GRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  
Sbjct: 48  GRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQH 107

Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
           P  +KT++RA+WGKVTR HGN+G+V
Sbjct: 108 PE-RKTRVRAVWGKVTRIHGNTGAV 131



 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +3

Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
           RA+F  NLP  AMGHRIR+MLYPSRI
Sbjct: 132 RARFNRNLPGHAMGHRIRIMLYPSRI 157


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  124 bits (298), Expect = 6e-29
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +1

Query: 1   GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 180
           GRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  
Sbjct: 48  GRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQH 107

Query: 181 PRGKKTKLRAIWGKVTRPHGNSGSV 255
           P  +KT++RA+WGKVTR HGN+G+V
Sbjct: 108 PE-RKTRVRAVWGKVTRIHGNTGAV 131



 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +3

Query: 255 RAKFKSNLPAQAMGHRIRVMLYPSRI 332
           RA+F  NLP  AMGHRIR+MLYPSRI
Sbjct: 132 RARFNRNLPGHAMGHRIRIMLYPSRI 157


>AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin
            protein.
          Length = 6658

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +1

Query: 130  HCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVEPSSSLTSLPRLWD 297
            +C+  + A+    IPG P     K    W K  R   N   +  +  +TSLP+ +D
Sbjct: 5384 NCIQNHNAQFTCTIPGVP-----KPTISWYKGAREISNGAGITCTQKVTSLPKYYD 5434


>AE013599-3433|AAF46878.2|  147|Drosophila melanogaster CG30196-PA
           protein.
          Length = 147

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 316 SITRILC--PIAWAGRLDLNLARHCQSC 239
           S+  +LC  PI W GR D+N   +C SC
Sbjct: 59  SLNVLLCCNPIRWKGRHDVN--HYCSSC 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,733,206
Number of Sequences: 53049
Number of extensions: 413029
Number of successful extensions: 1169
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)