Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a08r
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071004-1|AAL48626.1|  109|Drosophila melanogaster RE09053p pro...   122   6e-28
AE014134-3007|AAF53732.1|  109|Drosophila melanogaster CG15168-P...   122   6e-28
AE014298-1069|AAF46280.1| 1767|Drosophila melanogaster CG15327-P...    30   4.1  

>AY071004-1|AAL48626.1|  109|Drosophila melanogaster RE09053p
           protein.
          Length = 109

 Score =  122 bits (294), Expect = 6e-28
 Identities = 51/102 (50%), Positives = 73/102 (71%)
 Frame = -2

Query: 679 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVA 500
           F+K+++I GF SL H AFSA  HR+YLR+T QE+ +LPLDI++Q V+SL  V++ ++ + 
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIV 65

Query: 499 GNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKALSYDYVP 374
           GN +EI A  ++    W+T  N PSFY FNHRG+AL+  Y P
Sbjct: 66  GNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRALNPGYTP 107


>AE014134-3007|AAF53732.1|  109|Drosophila melanogaster CG15168-PA
           protein.
          Length = 109

 Score =  122 bits (294), Expect = 6e-28
 Identities = 51/102 (50%), Positives = 73/102 (71%)
 Frame = -2

Query: 679 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVA 500
           F+K+++I GF SL H AFSA  HR+YLR+T QE+ +LPLDI++Q V+SL  V++ ++ + 
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIV 65

Query: 499 GNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKALSYDYVP 374
           GN +EI A  ++    W+T  N PSFY FNHRG+AL+  Y P
Sbjct: 66  GNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRALNPGYTP 107


>AE014298-1069|AAF46280.1| 1767|Drosophila melanogaster CG15327-PA
            protein.
          Length = 1767

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 436  NLPSFYIFNHRGKALSYDYVPTPTKAD 356
            N+ SF IF H  + L++D +PT T  D
Sbjct: 1678 NMRSFGIFQHHSQILAWDNLPTTTDTD 1704


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,504,218
Number of Sequences: 53049
Number of extensions: 617927
Number of successful extensions: 1417
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)