Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A03
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071513-1|AAL49135.1|   83|Drosophila melanogaster RE56733p pro...   117   8e-27
AE014296-3770|AAN11412.1|   83|Drosophila melanogaster CG32230-P...   117   8e-27
AE014296-3769|AAN11411.1|   83|Drosophila melanogaster CG32230-P...   117   8e-27
AL121806-9|CAB65885.1|  756|Drosophila melanogaster EG:BACR42I17...    29   2.6  
AE014298-160|AAF45592.2|  756|Drosophila melanogaster CG14625-PB...    29   2.6  
AE014297-466|AAS65121.1|  360|Drosophila melanogaster CG33324-PA...    29   3.4  

>AY071513-1|AAL49135.1|   83|Drosophila melanogaster RE56733p
           protein.
          Length = 83

 Score =  117 bits (281), Expect = 8e-27
 Identities = 50/81 (61%), Positives = 59/81 (72%)
 Frame = +2

Query: 98  MQGXXXXXXXXXXALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAYRNK 277
           MQG          ALIPLYVCVG G  GAV+Y  RLA RNPDV+WN+ +NPEPW+ Y+ K
Sbjct: 1   MQGLGLQSLKKNPALIPLYVCVGAGAIGAVYYMARLATRNPDVTWNRTSNPEPWQEYKEK 60

Query: 278 QYKFYSPIRDYSKEESPAPKY 340
           QYKFYSP+RDYSK +S AP +
Sbjct: 61  QYKFYSPVRDYSKTKSAAPNF 81


>AE014296-3770|AAN11412.1|   83|Drosophila melanogaster CG32230-PB,
           isoform B protein.
          Length = 83

 Score =  117 bits (281), Expect = 8e-27
 Identities = 50/81 (61%), Positives = 59/81 (72%)
 Frame = +2

Query: 98  MQGXXXXXXXXXXALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAYRNK 277
           MQG          ALIPLYVCVG G  GAV+Y  RLA RNPDV+WN+ +NPEPW+ Y+ K
Sbjct: 1   MQGLGLQSLKKNPALIPLYVCVGAGAIGAVYYMARLATRNPDVTWNRTSNPEPWQEYKEK 60

Query: 278 QYKFYSPIRDYSKEESPAPKY 340
           QYKFYSP+RDYSK +S AP +
Sbjct: 61  QYKFYSPVRDYSKTKSAAPNF 81


>AE014296-3769|AAN11411.1|   83|Drosophila melanogaster CG32230-PA,
           isoform A protein.
          Length = 83

 Score =  117 bits (281), Expect = 8e-27
 Identities = 50/81 (61%), Positives = 59/81 (72%)
 Frame = +2

Query: 98  MQGXXXXXXXXXXALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAYRNK 277
           MQG          ALIPLYVCVG G  GAV+Y  RLA RNPDV+WN+ +NPEPW+ Y+ K
Sbjct: 1   MQGLGLQSLKKNPALIPLYVCVGAGAIGAVYYMARLATRNPDVTWNRTSNPEPWQEYKEK 60

Query: 278 QYKFYSPIRDYSKEESPAPKY 340
           QYKFYSP+RDYSK +S AP +
Sbjct: 61  QYKFYSPVRDYSKTKSAAPNF 81


>AL121806-9|CAB65885.1|  756|Drosophila melanogaster EG:BACR42I17.8
           protein.
          Length = 756

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 239 SCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGSVLA 99
           S S +   Y  P    + QLHH     +H +      +  LRGS LA
Sbjct: 385 SSSTVRPKYTVPPTTKQQQLHHHQQQVLHPQHHSHQIAGKLRGSSLA 431


>AE014298-160|AAF45592.2|  756|Drosophila melanogaster CG14625-PB
           protein.
          Length = 756

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 239 SCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGSVLA 99
           S S +   Y  P    + QLHH     +H +      +  LRGS LA
Sbjct: 385 SSSTVRPKYTVPPTTKQQQLHHHQQQVLHPQHHSHQIAGKLRGSSLA 431


>AE014297-466|AAS65121.1|  360|Drosophila melanogaster CG33324-PA
           protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 248 GWSSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLR-GSVL 102
           G S  S  HQ      A+++ Q HH LS H+     K  ASS+L  GS L
Sbjct: 123 GGSGGSHPHQQQQQLQAQHQQQQHH-LSDHMSDSSMKSSASSSLHAGSSL 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,613,737
Number of Sequences: 53049
Number of extensions: 385806
Number of successful extensions: 1202
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)