Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0117
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   1.6  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   1.6  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   1.6  
AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    30   3.7  
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    30   3.7  
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB...    29   6.5  
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA...    29   6.5  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    29   8.6  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 430 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 302
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 430 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 302
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 430 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 302
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 641 PLNGGRTESCRSRTK-RNRHDLRLGRSAEGRRTRVRIQS 528
           PL GGR+ S RSR++ R+R   R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 641 PLNGGRTESCRSRTK-RNRHDLRLGRSAEGRRTRVRIQS 528
           PL GGR+ S RSR++ R+R   R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
            isoform B protein.
          Length = 4685

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 466  IMRXQKLYIFNMTLGKSSYVSDWIRTRV 549
            + R   LYI    LG S YVS W+ TRV
Sbjct: 2425 VSRAGILYINPQDLGWSPYVSSWLETRV 2452


>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
            isoform A protein.
          Length = 4543

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 466  IMRXQKLYIFNMTLGKSSYVSDWIRTRV 549
            + R   LYI    LG S YVS W+ TRV
Sbjct: 2283 VSRAGILYINPQDLGWSPYVSSWLETRV 2310


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
            protein.
          Length = 2938

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -2

Query: 645  LTVERRSYRIVPIAHETKPTRLTARKIRGRPENAGPDPVRNVRRFS 508
            LT  + +  +VP  H   PT    R+ RG+     P P ++V R S
Sbjct: 1989 LTGPQLNLGVVPTYHVHTPTPNAHRRARGQMATPAPPPTQSVLRLS 2034


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,042,188
Number of Sequences: 53049
Number of extensions: 772641
Number of successful extensions: 2307
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)