Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30010
         (735 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...   392   e-109
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...   392   e-109
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...   392   e-109
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...   392   e-109
AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p pro...    64   1e-10
AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA...    64   1e-10
AY060753-1|AAL28301.1|  271|Drosophila melanogaster GH20409p pro...    37   0.033
AE014134-406|AAF51257.1|  271|Drosophila melanogaster CG3557-PA ...    37   0.033
AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl oxidas...    30   2.8  
AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA...    30   2.8  
AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p pro...    29   5.0  
AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA...    29   5.0  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score =  392 bits (964), Expect = e-109
 Identities = 186/225 (82%), Positives = 206/225 (91%)
 Frame = +3

Query: 57  MGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTM 236
           M RE+KA WK+ YFIK+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 237 MRKAIKDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
           MRKAI+ HL+NNP LEKLLPHIKGNVG VFT+GDL EVRDKLLE+KV+APARPGAIAPL 
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120

Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
           V+IPA NTGLGP KT FFQALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNI
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180

Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 731
           SPFSYGL+  QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAV 225


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score =  392 bits (964), Expect = e-109
 Identities = 186/225 (82%), Positives = 206/225 (91%)
 Frame = +3

Query: 57  MGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTM 236
           M RE+KA WK+ YFIK+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 237 MRKAIKDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
           MRKAI+ HL+NNP LEKLLPHIKGNVG VFT+GDL EVRDKLLE+KV+APARPGAIAPL 
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120

Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
           V+IPA NTGLGP KT FFQALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNI
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180

Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 731
           SPFSYGL+  QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAV 225


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score =  392 bits (964), Expect = e-109
 Identities = 186/225 (82%), Positives = 206/225 (91%)
 Frame = +3

Query: 57  MGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTM 236
           M RE+KA WK+ YFIK+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 237 MRKAIKDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
           MRKAI+ HL+NNP LEKLLPHIKGNVG VFT+GDL EVRDKLLE+KV+APARPGAIAPL 
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120

Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
           V+IPA NTGLGP KT FFQALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNI
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180

Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 731
           SPFSYGL+  QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAV 225


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score =  392 bits (964), Expect = e-109
 Identities = 186/225 (82%), Positives = 206/225 (91%)
 Frame = +3

Query: 57  MGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTM 236
           M RE+KA WK+ YFIK+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 237 MRKAIKDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
           MRKAI+ HL+NNP LEKLLPHIKGNVG VFT+GDL EVRDKLLE+KV+APARPGAIAPL 
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120

Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
           V+IPA NTGLGP KT FFQALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNI
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180

Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 731
           SPFSYGL+  QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAV 225


>AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p
           protein.
          Length = 256

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
 Frame = +3

Query: 30  RSPYATLSRMGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSS 209
           R    +L++  R+  A WK      I   + +YP  F+    N+ +  ++ +R  L+ +S
Sbjct: 6   RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64

Query: 210 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQA 383
             + GKN +M+  +      +  P L KL   + G VGL+FT     EV +         
Sbjct: 65  RFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVE 124

Query: 384 PARPGAIAPLSVVIPAHN-TGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVG 560
            AR G +A  +V +PA              ++L +PTK+ KG + + +D  + + G  + 
Sbjct: 125 YARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLT 184

Query: 561 ASEATLLNML 590
             +A +L ++
Sbjct: 185 PEQARILKLV 194


>AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA
           protein.
          Length = 256

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
 Frame = +3

Query: 30  RSPYATLSRMGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSS 209
           R    +L++  R+  A WK      I   + +YP  F+    N+ +  ++ +R  L+ +S
Sbjct: 6   RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64

Query: 210 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQA 383
             + GKN +M+  +      +  P L KL   + G VGL+FT     EV +         
Sbjct: 65  RFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVE 124

Query: 384 PARPGAIAPLSVVIPAHN-TGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVG 560
            AR G +A  +V +PA              ++L +PTK+ KG + + +D  + + G  + 
Sbjct: 125 YARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLT 184

Query: 561 ASEATLLNML 590
             +A +L ++
Sbjct: 185 PEQARILKLV 194


>AY060753-1|AAL28301.1|  271|Drosophila melanogaster GH20409p
           protein.
          Length = 271

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 29/78 (37%), Positives = 39/78 (50%)
 Frame = +1

Query: 151 PITWARNRCSRSVXRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLA*CSP 330
           P   A + CS S      P S +W     C+KPS T     +P+R CC + +A L  CSP
Sbjct: 77  PAPCAPSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKPTR-CCASPKAPLVPCSP 131

Query: 331 AETSLRSVTNCWRTKSRL 384
            +T   S   C++T SRL
Sbjct: 132 MDTPKSS---CFKTASRL 146


>AE014134-406|AAF51257.1|  271|Drosophila melanogaster CG3557-PA
           protein.
          Length = 271

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 29/78 (37%), Positives = 39/78 (50%)
 Frame = +1

Query: 151 PITWARNRCSRSVXRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLA*CSP 330
           P   A + CS S      P S +W     C+KPS T     +P+R CC + +A L  CSP
Sbjct: 77  PAPCAPSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKPTR-CCASPKAPLVPCSP 131

Query: 331 AETSLRSVTNCWRTKSRL 384
            +T   S   C++T SRL
Sbjct: 132 MDTPKSS---CFKTASRL 146


>AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl
           oxidase-like 2 protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -1

Query: 468 RNRFSMDRGRCCGRE*RLT---MGQWHRDELEPGLCSPTVCHGPQRGL 334
           R RF MD   C G E  L       W  ++ EPG  +  VC+ P+  L
Sbjct: 120 RRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENAL 167


>AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA
           protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -1

Query: 468 RNRFSMDRGRCCGRE*RLT---MGQWHRDELEPGLCSPTVCHGPQRGL 334
           R RF MD   C G E  L       W  ++ EPG  +  VC+ P+  L
Sbjct: 120 RRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENAL 167


>AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p
           protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 206 QYRAHGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLSVHPRRPR*GP 352
           Q   + + H  AQ+HQ P   Q +P++ +   Q   + + +  RPR  P
Sbjct: 230 QQNVYQQYHPQAQAHQAPQPHQPAPQQQLPPEQQVPYQTHYQERPRYEP 278


>AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA
           protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 206 QYRAHGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLSVHPRRPR*GP 352
           Q   + + H  AQ+HQ P   Q +P++ +   Q   + + +  RPR  P
Sbjct: 230 QQNVYQQYHPQAQAHQAPQPHQPAPQQQLPPEQQVPYQTHYQERPRYEP 278


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,262,937
Number of Sequences: 53049
Number of extensions: 876230
Number of successful extensions: 3371
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3367
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)