Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0007
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003493-1|AAO39497.1| 1035|Drosophila melanogaster RE49017p pro...    31   2.5  
AE014297-1841|AAF55048.2| 1021|Drosophila melanogaster CG8538-PA...    31   2.5  
AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    30   4.4  
AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA ...    30   4.4  
AE014135-16|AAN06549.1|  687|Drosophila melanogaster CG32005-PA ...    30   4.4  

>BT003493-1|AAO39497.1| 1035|Drosophila melanogaster RE49017p
           protein.
          Length = 1035

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 513 LKPEQLYASTMLHG-SNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACS 665
           LKP+   A++ L   SNS  +Q L+   +    + +TRT  SH E    +CS
Sbjct: 514 LKPQSTGAASSLEPISNSTSYQGLENAAATTASQTETRTGPSHGEGSTGSCS 565


>AE014297-1841|AAF55048.2| 1021|Drosophila melanogaster CG8538-PA
           protein.
          Length = 1021

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 513 LKPEQLYASTMLHG-SNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACS 665
           LKP+   A++ L   SNS  +Q L+   +    + +TRT  SH E    +CS
Sbjct: 500 LKPQSTGAASSLEPISNSTSYQGLENAAATTASQTETRTGPSHGEGSTGSCS 551


>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 22/76 (28%), Positives = 32/76 (42%)
 Frame = -3

Query: 681 CAVCRRNMPVFRFLYENQWSVFVLPFLDRSTTDPVLGRTLSSNREALCSRITVPVSNILG 502
           C    +N P   F   N+ +  VL F +    D V G   +    AL  R  V V ++  
Sbjct: 394 CVKLPKNSP--NFGQNNEHNAQVLSFGENVILDFVNGNLAAIVSNALRGRRCVHVISVAA 451

Query: 501 KAGCWHCSLRHYSVVS 454
             GC+HC     +VV+
Sbjct: 452 LLGCFHCRQSVVAVVA 467


>AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA
           protein.
          Length = 730

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 658 HVPSTHRTHHSAYKGGMYRTITLPTARQAFIVTPP 762
           + PST  T   +  G M ++ +LP AR+ ++V PP
Sbjct: 245 YAPSTFHTQFISQSGAMEKSYSLP-ARKPYVVVPP 278


>AE014135-16|AAN06549.1|  687|Drosophila melanogaster CG32005-PA
           protein.
          Length = 687

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 7/142 (4%)
 Frame = +3

Query: 285 SRSDDIGTQYTNPNTKRHGFFANESQDSKHFESSRPRSFKARKEPTG---ERSNRSDSPR 455
           SRSD +   ++      +   +   Q ++  E+ +  SF+ R E        S  +  P 
Sbjct: 81  SRSDGMEASFSELLLSPNKLISQPWQTAEEIENWQNDSFRQRNEMFSCIYTNSMLNQQPC 140

Query: 456 KQXXXXXXXXXXXQLFRGYLKPEQLYAS--TMLH--GSNSEFFQELDQLCSDPEREEQTR 623
            Q           +L R  L   + +++   M+H  GS     +E D+L S P  ++   
Sbjct: 141 SQQQLLATQLLYARLLRSQLAEREFHSNKFNMVHYSGSKKTMLRE-DELLSTPSSQDNNN 199

Query: 624 TIDSHKETEKRACSFDTPHTSF 689
            I   K+ E      D P   F
Sbjct: 200 NIKLIKDIENSISCVDPPLFEF 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,328,626
Number of Sequences: 53049
Number of extensions: 784192
Number of successful extensions: 2558
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2558
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)