Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0076
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061504-1|AAL29052.1|  263|Drosophila melanogaster LD46221p pro...    29   5.3  
AE013599-2643|AAF57732.2|  263|Drosophila melanogaster CG10916-P...    29   5.3  
U89162-1|AAC62307.1|  435|Drosophila melanogaster Int6 protein.        28   9.3  
AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p pro...    28   9.3  
AF132551-1|AAD27850.1|  435|Drosophila melanogaster GM01233p pro...    28   9.3  
AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-P...    28   9.3  
AE014296-2801|AAF49412.1|  435|Drosophila melanogaster CG9677-PA...    28   9.3  

>AY061504-1|AAL29052.1|  263|Drosophila melanogaster LD46221p
           protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 319 PTRNLSRSLNIRLDICN-LFISNEVLFS 399
           PT + S SLNI   ICN  F +N+++FS
Sbjct: 20  PTNDSSPSLNILCAICNEFFRANDIIFS 47


>AE013599-2643|AAF57732.2|  263|Drosophila melanogaster CG10916-PA
           protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 319 PTRNLSRSLNIRLDICN-LFISNEVLFS 399
           PT + S SLNI   ICN  F +N+++FS
Sbjct: 20  PTNDSSPSLNILCAICNEFFRANDIIFS 47


>U89162-1|AAC62307.1|  435|Drosophila melanogaster Int6 protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 375 HFE*SFIFFLIGKEIYFQQQNLKRMLQGTITGPDFLSHTFNCTANFRL 518
           H     + FL GKEIY QQ+ L+ +L+ T+   + + +T +      L
Sbjct: 17  HLTFPLLEFLCGKEIYNQQELLEYILE-TVNKTNMIDYTMDTRKRLNL 63


>AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p
           protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 375 HFE*SFIFFLIGKEIYFQQQNLKRMLQGTITGPDFLSHTFNCTANFRL 518
           H     + FL GKEIY QQ+ L+ +L+ T+   + + +T +      L
Sbjct: 17  HLTFPLLEFLCGKEIYNQQELLEYILE-TVNKTNMIDYTMDTRKRLNL 63


>AF132551-1|AAD27850.1|  435|Drosophila melanogaster GM01233p
           protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 375 HFE*SFIFFLIGKEIYFQQQNLKRMLQGTITGPDFLSHTFNCTANFRL 518
           H     + FL GKEIY QQ+ L+ +L+ T+   + + +T +      L
Sbjct: 17  HLTFPLLEFLCGKEIYNQQELLEYILE-TVNKTNMIDYTMDTRKRLNL 63


>AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-PA
           protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 314 GFQHVIYPVASTYAWTFVTCSFRMKFYFLF 403
           GFQH+I+ V+ TY   F+ C+  M F F++
Sbjct: 164 GFQHIIWWVSYTY--VFIICNSIMCFGFIW 191


>AE014296-2801|AAF49412.1|  435|Drosophila melanogaster CG9677-PA
           protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 375 HFE*SFIFFLIGKEIYFQQQNLKRMLQGTITGPDFLSHTFNCTANFRL 518
           H     + FL GKEIY QQ+ L+ +L+ T+   + + +T +      L
Sbjct: 17  HLTFPLLEFLCGKEIYNQQELLEYILE-TVNKTNMIDYTMDTRKRLNL 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,340,292
Number of Sequences: 53049
Number of extensions: 400696
Number of successful extensions: 683
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)