Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0019
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069511-1|AAL39656.1|  438|Drosophila melanogaster LD23157p pro...   257   1e-68
AE014296-3335|AAO41278.1|  438|Drosophila melanogaster CG5605-PG...   257   1e-68
AE014296-3334|AAN12123.1|  438|Drosophila melanogaster CG5605-PF...   257   1e-68
AE014296-3333|AAN12122.1|  438|Drosophila melanogaster CG5605-PE...   257   1e-68
AE014296-3332|AAN12121.1|  438|Drosophila melanogaster CG5605-PC...   257   1e-68
AE014296-3331|AAF51575.2|  438|Drosophila melanogaster CG5605-PB...   257   1e-68
AE014296-3330|AAF51574.2|  438|Drosophila melanogaster CG5605-PA...   257   1e-68
M16534-1|AAA28429.1|  336|Drosophila melanogaster protein ( D.me...    32   0.91 
AY069553-1|AAL39698.1|  336|Drosophila melanogaster LD27706p pro...    32   0.91 
AE014296-3762|ABI31271.1|  336|Drosophila melanogaster CG17520-P...    32   0.91 
AE014296-3761|AAN11416.1|  336|Drosophila melanogaster CG17520-P...    32   0.91 
AE014296-3760|AAF45439.1|  336|Drosophila melanogaster CG17520-P...    32   0.91 
AE014296-3759|AAN11415.1|  336|Drosophila melanogaster CG17520-P...    32   0.91 
BT001667-1|AAN71422.1|  566|Drosophila melanogaster RE48979p pro...    30   2.8  
AE013599-3407|AAF46856.1|  566|Drosophila melanogaster CG6018-PA...    30   2.8  

>AY069511-1|AAL39656.1|  438|Drosophila melanogaster LD23157p
           protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>AE014296-3335|AAO41278.1|  438|Drosophila melanogaster CG5605-PG,
           isoform G protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>AE014296-3334|AAN12123.1|  438|Drosophila melanogaster CG5605-PF,
           isoform F protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>AE014296-3333|AAN12122.1|  438|Drosophila melanogaster CG5605-PE,
           isoform E protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>AE014296-3332|AAN12121.1|  438|Drosophila melanogaster CG5605-PC,
           isoform C protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>AE014296-3331|AAF51575.2|  438|Drosophila melanogaster CG5605-PB,
           isoform B protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>AE014296-3330|AAF51574.2|  438|Drosophila melanogaster CG5605-PA,
           isoform A protein.
          Length = 438

 Score =  257 bits (629), Expect = 1e-68
 Identities = 124/125 (99%), Positives = 125/125 (100%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK
Sbjct: 4   EETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>M16534-1|AAA28429.1|  336|Drosophila melanogaster protein (
           D.melanogaster caseinkinase II alpha subunit mRNA,
           complete cds. ).
          Length = 336

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 496
           KIK+ IK LE  RG GT++I+L+   KD +SR   ++
Sbjct: 75  KIKREIKILENLRG-GTNIITLLAVVKDPVSRTPALI 110


>AY069553-1|AAL39698.1|  336|Drosophila melanogaster LD27706p
           protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 496
           KIK+ IK LE  RG GT++I+L+   KD +SR   ++
Sbjct: 75  KIKREIKILENLRG-GTNIITLLAVVKDPVSRTPALI 110


>AE014296-3762|ABI31271.1|  336|Drosophila melanogaster CG17520-PD,
           isoform D protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 496
           KIK+ IK LE  RG GT++I+L+   KD +SR   ++
Sbjct: 75  KIKREIKILENLRG-GTNIITLLAVVKDPVSRTPALI 110


>AE014296-3761|AAN11416.1|  336|Drosophila melanogaster CG17520-PC,
           isoform C protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 496
           KIK+ IK LE  RG GT++I+L+   KD +SR   ++
Sbjct: 75  KIKREIKILENLRG-GTNIITLLAVVKDPVSRTPALI 110


>AE014296-3760|AAF45439.1|  336|Drosophila melanogaster CG17520-PB,
           isoform B protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 496
           KIK+ IK LE  RG GT++I+L+   KD +SR   ++
Sbjct: 75  KIKREIKILENLRG-GTNIITLLAVVKDPVSRTPALI 110


>AE014296-3759|AAN11415.1|  336|Drosophila melanogaster CG17520-PA,
           isoform A protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 496
           KIK+ IK LE  RG GT++I+L+   KD +SR   ++
Sbjct: 75  KIKREIKILENLRG-GTNIITLLAVVKDPVSRTPALI 110


>BT001667-1|AAN71422.1|  566|Drosophila melanogaster RE48979p
           protein.
          Length = 566

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 545 LSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEP 688
           L   G + S +  L+ + ++P + L  YC +IVT+E +     + F P
Sbjct: 268 LGYAGNLESEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAP 315


>AE013599-3407|AAF46856.1|  566|Drosophila melanogaster CG6018-PA
           protein.
          Length = 566

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 545 LSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEP 688
           L   G + S +  L+ + ++P + L  YC +IVT+E +     + F P
Sbjct: 268 LGYAGNLESEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAP 315


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,670,616
Number of Sequences: 53049
Number of extensions: 652508
Number of successful extensions: 1885
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)