Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0110
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3070|AAF46624.1|  418|Drosophila melanogaster CG15226-P...    29   4.3  
BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p pro...    29   5.7  
AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA ...    29   5.7  

>AE013599-3070|AAF46624.1|  418|Drosophila melanogaster CG15226-PA
           protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 614 IETVVTFFLLPYRQTSIRPTRW*VVTVAHSNARDQTKPLPTKYL 483
           + T  T    P   T++ P      + A  NAR QT PLP +Y+
Sbjct: 317 VATQTTTTASPTTSTAVAPADTDTTSTAVQNARIQTTPLPYRYV 360


>BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p
           protein.
          Length = 391

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -2

Query: 466 IKPTIADV-YPSNGVK-YPFNMPWDLTFQDRRQHPHYDKAD 350
           +KP  +DV + S GV  YPF  PW++   D+ +   YD+ D
Sbjct: 220 LKPVQSDVVHQSAGVSFYPFVQPWEVV--DQHEDDDYDEDD 258


>AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -2

Query: 466 IKPTIADV-YPSNGVK-YPFNMPWDLTFQDRRQHPHYDKAD 350
           +KP  +DV + S GV  YPF  PW++   D+ +   YD+ D
Sbjct: 208 LKPVQSDVVHQSAGVSFYPFVQPWEVV--DQHEDDDYDEDD 246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,009,610
Number of Sequences: 53049
Number of extensions: 668807
Number of successful extensions: 1736
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)