Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0105
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022385-1|AAY54801.1|  124|Drosophila melanogaster IP05263p pro...    31   1.8  
BT003780-1|AAO41461.1|  143|Drosophila melanogaster LP04723p pro...    29   7.4  

>BT022385-1|AAY54801.1|  124|Drosophila melanogaster IP05263p
           protein.
          Length = 124

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -3

Query: 635 SCAGFIMPTCGAAWC-NCVY*ICVFW-TPDPG--ACCPCIKGISNSC 507
           SC G    TC   WC +C+      W  PD G   CC C+    + C
Sbjct: 78  SCCGIFPETCCGPWCESCLDPSWFSWLAPDLGRSCCCACMTCCRSKC 124


>BT003780-1|AAO41461.1|  143|Drosophila melanogaster LP04723p
           protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 321 SSVHELEWSVHKLLPKIMIGH-TSCTICTRDLKISKCPCPLLATP 452
           S++H+   SV ++ PK ++ H T C         SK P P++ TP
Sbjct: 64  SALHDTPHSVSRMTPKKILCHQTPCHTIACTHARSKTPKPMITTP 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,070,087
Number of Sequences: 53049
Number of extensions: 703790
Number of successful extensions: 2142
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2142
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)