Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0020
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2766|AAF53565.1|  431|Drosophila melanogaster CG13278-P...    29   4.9  
AY058691-1|AAL13920.1|  842|Drosophila melanogaster LD41005p pro...    28   8.5  
AE013599-3207|AAF46727.1|  842|Drosophila melanogaster CG10496-P...    28   8.5  

>AE014134-2766|AAF53565.1|  431|Drosophila melanogaster CG13278-PA
           protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 502 ETEVFKSVGDSDSACSDESGYSEFLDGKESI 410
           +T+ F +V   + ACSD+  YS+   G++ I
Sbjct: 223 QTQYFSNVQTREEACSDDENYSDLKCGEQCI 253


>AY058691-1|AAL13920.1|  842|Drosophila melanogaster LD41005p
           protein.
          Length = 842

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 385 IMCRDFMKIGADYKFTVTCSFLQSILNFICATWSLHTRTTLAL 257
           + C+D     +DY+    C F   +  F  A  SL    TLAL
Sbjct: 258 LKCKDEQDSDSDYELIRHCMFSSQVAPFTSAAQSLANANTLAL 300


>AE013599-3207|AAF46727.1|  842|Drosophila melanogaster CG10496-PA
           protein.
          Length = 842

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 385 IMCRDFMKIGADYKFTVTCSFLQSILNFICATWSLHTRTTLAL 257
           + C+D     +DY+    C F   +  F  A  SL    TLAL
Sbjct: 258 LKCKDEQDSDSDYELIRHCMFSSQVAPFTSAAQSLANANTLAL 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,354,983
Number of Sequences: 53049
Number of extensions: 450961
Number of successful extensions: 898
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)