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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0085
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113545-1|AAM29550.1|  878|Drosophila melanogaster RE62270p pro...   233   2e-61
AF191563-1|AAF05719.1|  879|Drosophila melanogaster coatomer pro...   231   7e-61
AE014297-4756|AAF57160.1|  879|Drosophila melanogaster CG1528-PA...   231   7e-61
BT001628-1|AAN71383.1|  883|Drosophila melanogaster RE37840p pro...   229   2e-60
AE014297-4757|AAN14275.1|  883|Drosophila melanogaster CG1528-PB...   229   2e-60
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro...    40   0.003
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei...    40   0.003
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.      40   0.003
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA...    40   0.003
BT011104-1|AAR82770.1|  389|Drosophila melanogaster LP09056p pro...    28   8.5  
AY484405-1|AAR86939.1|  857|Drosophila melanogaster reverse tran...    28   8.5  
AY484404-1|AAR86938.1|  857|Drosophila melanogaster reverse tran...    28   8.5  
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC...    28   8.5  
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB...    28   8.5  
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA...    28   8.5  

>AY113545-1|AAM29550.1|  878|Drosophila melanogaster RE62270p
           protein.
          Length = 878

 Score =  233 bits (569), Expect = 2e-61
 Identities = 112/150 (74%), Positives = 130/150 (86%)
 Frame = +1

Query: 61  SIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELT 240
           S  + + D ++  SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L 
Sbjct: 3   SFRREKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLV 62

Query: 241 TQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRP 420
            +EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR 
Sbjct: 63  AREATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRA 122

Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKN 510
           AAIRALCSITD+TMLQA+ERYMKQ IVDKN
Sbjct: 123 AAIRALCSITDNTMLQAVERYMKQCIVDKN 152



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
           SC+ +  + LR A+  T  D+V+RW NEAQE
Sbjct: 156 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 183


>AF191563-1|AAF05719.1|  879|Drosophila melanogaster coatomer
           protein gamma subunit protein.
          Length = 879

 Score =  231 bits (564), Expect = 7e-61
 Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 3/148 (2%)
 Frame = +1

Query: 76  RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 246
           R    EED   SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L  +
Sbjct: 6   REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65

Query: 247 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 426
           EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66  EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125

Query: 427 IRALCSITDSTMLQAIERYMKQAIVDKN 510
           IRALCSITD+TMLQA+ERYMKQ IVDKN
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKN 153



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
           SC+ +  + LR A+  T  D+V+RW NEAQE
Sbjct: 157 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 184


>AE014297-4756|AAF57160.1|  879|Drosophila melanogaster CG1528-PA,
           isoform A protein.
          Length = 879

 Score =  231 bits (564), Expect = 7e-61
 Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 3/148 (2%)
 Frame = +1

Query: 76  RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 246
           R    EED   SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L  +
Sbjct: 6   REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65

Query: 247 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 426
           EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66  EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125

Query: 427 IRALCSITDSTMLQAIERYMKQAIVDKN 510
           IRALCSITD+TMLQA+ERYMKQ IVDKN
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKN 153



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
           SC+ +  + LR A+  T  D+V+RW NEAQE
Sbjct: 157 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 184


>BT001628-1|AAN71383.1|  883|Drosophila melanogaster RE37840p
           protein.
          Length = 883

 Score =  229 bits (561), Expect = 2e-60
 Identities = 110/137 (80%), Positives = 124/137 (90%)
 Frame = +1

Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 279
           SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L  +EATD FFA TK
Sbjct: 21  SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80

Query: 280 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 459
           LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81  LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140

Query: 460 MLQAIERYMKQAIVDKN 510
           MLQA+ERYMKQ IVDKN
Sbjct: 141 MLQAVERYMKQCIVDKN 157



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
           SC+ +  + LR A+  T  D+V+RW NEAQE
Sbjct: 161 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 188


>AE014297-4757|AAN14275.1|  883|Drosophila melanogaster CG1528-PB,
           isoform B protein.
          Length = 883

 Score =  229 bits (561), Expect = 2e-60
 Identities = 110/137 (80%), Positives = 124/137 (90%)
 Frame = +1

Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 279
           SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L  +EATD FFA TK
Sbjct: 21  SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80

Query: 280 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 459
           LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81  LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140

Query: 460 MLQAIERYMKQAIVDKN 510
           MLQA+ERYMKQ IVDKN
Sbjct: 141 MLQAVERYMKQCIVDKN 157



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
           SC+ +  + LR A+  T  D+V+RW NEAQE
Sbjct: 161 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 188


>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
           protein.
          Length = 1159

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +1

Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
           ++A+D+F A  K   SK++ +++LVY+ +   +   QD+ +++ S+  + +   +   R 
Sbjct: 55  RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 114

Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
           +A+R L SI  S ++  +   ++ +  D +P
Sbjct: 115 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 145


>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
           protein.
          Length = 1160

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +1

Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
           ++A+D+F A  K   SK++ +++LVY+ +   +   QD+ +++ S+  + +   +   R 
Sbjct: 75  RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134

Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
           +A+R L SI  S ++  +   ++ +  D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165


>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
          Length = 1160

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +1

Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
           ++A+D+F A  K   SK++ +++LVY+ +   +   QD+ +++ S+  + +   +   R 
Sbjct: 75  RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134

Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
           +A+R L SI  S ++  +   ++ +  D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165


>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
           protein.
          Length = 1160

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +1

Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
           ++A+D+F A  K   SK++ +++LVY+ +   +   QD+ +++ S+  + +   +   R 
Sbjct: 75  RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134

Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
           +A+R L SI  S ++  +   ++ +  D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165


>BT011104-1|AAR82770.1|  389|Drosophila melanogaster LP09056p
           protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
           + L H  L  +Q+    DAT+SS+GG S
Sbjct: 49  SGLLHTELREVQNAIDSDATESSSGGES 76


>AY484405-1|AAR86939.1|  857|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 213
           SN   N D+TT+LQ+ +++N    H  + +HI+    Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820


>AY484404-1|AAR86938.1|  857|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 213
           SN   N D+TT+LQ+ +++N    H  + +HI+    Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820


>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
           isoform C protein.
          Length = 1570

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
           + L H  L  +Q+    DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623


>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
           isoform B protein.
          Length = 1570

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
           + L H  L  +Q+    DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623


>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
           isoform A protein.
          Length = 1570

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
           + L H  L  +Q+    DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,906,785
Number of Sequences: 53049
Number of extensions: 556288
Number of successful extensions: 1249
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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