Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0069
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p pro...   116   3e-26
AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB...   116   3e-26
AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA...   116   3e-26
BT023811-1|AAZ66318.1|  971|Drosophila melanogaster LP23835p pro...    29   7.1  
AY119272-1|AAM51132.1|  670|Drosophila melanogaster SD25109p pro...    29   7.1  
AE013599-3891|AAF47220.2|  947|Drosophila melanogaster CG30169-P...    29   7.1  

>AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p
           protein.
          Length = 522

 Score =  116 bits (279), Expect = 3e-26
 Identities = 51/85 (60%), Positives = 66/85 (77%)
 Frame = +2

Query: 386 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 565
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPGGSV
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 566 KDRIAYRMFLDAEQKGILKPGKSVI 640
           KDRI YRM  DAE++G+LKPG ++I
Sbjct: 88  KDRIGYRMVQDAEEQGLLKPGYTII 112


>AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB,
           isoform B protein.
          Length = 522

 Score =  116 bits (279), Expect = 3e-26
 Identities = 51/85 (60%), Positives = 66/85 (77%)
 Frame = +2

Query: 386 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 565
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPGGSV
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 566 KDRIAYRMFLDAEQKGILKPGKSVI 640
           KDRI YRM  DAE++G+LKPG ++I
Sbjct: 88  KDRIGYRMVQDAEEQGLLKPGYTII 112


>AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA,
           isoform A protein.
          Length = 522

 Score =  116 bits (279), Expect = 3e-26
 Identities = 51/85 (60%), Positives = 66/85 (77%)
 Frame = +2

Query: 386 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 565
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPGGSV
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 566 KDRIAYRMFLDAEQKGILKPGKSVI 640
           KDRI YRM  DAE++G+LKPG ++I
Sbjct: 88  KDRIGYRMVQDAEEQGLLKPGYTII 112


>BT023811-1|AAZ66318.1|  971|Drosophila melanogaster LP23835p protein.
          Length = 971

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +2

Query: 299  IQAIKTINSNMSNHVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 478
            +Q++K  N++   H        +SA++   L   P +VR   R+Q++HS +  + G +PL
Sbjct: 822  VQSLK--NTSDIEHFKHDFFVEHSAKEEHPLCSQP-LVRTPRRSQEIHSSLSQLAGKSPL 878

Query: 479  VKLSK 493
             + +K
Sbjct: 879  DQATK 883


>AY119272-1|AAM51132.1|  670|Drosophila melanogaster SD25109p
           protein.
          Length = 670

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +2

Query: 299 IQAIKTINSNMSNHVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 478
           +Q++K  N++   H        +SA++   L   P +VR   R+Q++HS +  + G +PL
Sbjct: 521 VQSLK--NTSDIEHFKHDFFVEHSAKEEHPLCSQP-LVRTPRRSQEIHSSLSQLAGKSPL 577

Query: 479 VKLSK 493
            + +K
Sbjct: 578 DQATK 582


>AE013599-3891|AAF47220.2|  947|Drosophila melanogaster CG30169-PA
           protein.
          Length = 947

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +2

Query: 299 IQAIKTINSNMSNHVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 478
           +Q++K  N++   H        +SA++   L   P +VR   R+Q++HS +  + G +PL
Sbjct: 798 VQSLK--NTSDIEHFKHDFFVEHSAKEEHPLCSQP-LVRTPRRSQEIHSSLSQLAGKSPL 854

Query: 479 VKLSK 493
            + +K
Sbjct: 855 DQATK 859


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,837,524
Number of Sequences: 53049
Number of extensions: 543748
Number of successful extensions: 1153
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)