Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0031
         (350 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061575-1|AAL29123.1|  428|Drosophila melanogaster SD02746p pro...    75   3e-14
AF317419-1|AAK69597.1|  432|Drosophila melanogaster lysosomal-as...    75   3e-14
AE013599-705|AAF59049.3|  432|Drosophila melanogaster CG14767-PC...    75   3e-14
AE013599-704|AAF59050.2|  432|Drosophila melanogaster CG14767-PB...    75   3e-14
AE013599-703|AAM68833.2|  428|Drosophila melanogaster CG14767-PA...    75   3e-14
BT021444-1|AAX33592.1|  667|Drosophila melanogaster GH02866p pro...    30   0.72 
AE013599-3350|AAF46812.1|  667|Drosophila melanogaster CG6758-PA...    30   0.72 
AY051932-1|AAK93356.1|  562|Drosophila melanogaster LD41462p pro...    28   3.8  
AE014298-1854|AAF48234.1|  562|Drosophila melanogaster CG4332-PA...    28   3.8  
AE014298-2696|AAF48822.1|  116|Drosophila melanogaster CG15061-P...    27   5.1  

>AY061575-1|AAL29123.1|  428|Drosophila melanogaster SD02746p
           protein.
          Length = 428

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 108 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 287
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 288 WSNVGRTGDVLPTPLSNVE 344
              V  +   LPTPLS VE
Sbjct: 90  ---VDLSAPALPTPLSKVE 105


>AF317419-1|AAK69597.1|  432|Drosophila melanogaster
           lysosomal-associated transmembraneprotein protein.
          Length = 432

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 108 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 287
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 288 WSNVGRTGDVLPTPLSNVE 344
              V  +   LPTPLS VE
Sbjct: 90  ---VDLSAPALPTPLSKVE 105


>AE013599-705|AAF59049.3|  432|Drosophila melanogaster CG14767-PC,
           isoform C protein.
          Length = 432

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 108 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 287
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 288 WSNVGRTGDVLPTPLSNVE 344
              V  +   LPTPLS VE
Sbjct: 90  ---VDLSAPALPTPLSKVE 105


>AE013599-704|AAF59050.2|  432|Drosophila melanogaster CG14767-PB,
           isoform B protein.
          Length = 432

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 108 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 287
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 288 WSNVGRTGDVLPTPLSNVE 344
              V  +   LPTPLS VE
Sbjct: 90  ---VDLSAPALPTPLSKVE 105


>AE013599-703|AAM68833.2|  428|Drosophila melanogaster CG14767-PA,
           isoform A protein.
          Length = 428

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 108 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSS 287
           G+    E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+  +   + 
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYT- 89

Query: 288 WSNVGRTGDVLPTPLSNVE 344
              V  +   LPTPLS VE
Sbjct: 90  ---VDLSAPALPTPLSKVE 105


>BT021444-1|AAX33592.1|  667|Drosophila melanogaster GH02866p
           protein.
          Length = 667

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 321 AVHLQCAPHCSTNSLGMTHGPVHPAIEDHAQSLLKLLVPLGAGKGAMIP 175
           AVH+ C P C  N+  +  GP  P +    Q + +  VP+  G+G   P
Sbjct: 320 AVHMWCNPGCKVNNYLVVVGP-SPNMPQDFQMMKQSRVPVVGGRGPPPP 367


>AE013599-3350|AAF46812.1|  667|Drosophila melanogaster CG6758-PA
           protein.
          Length = 667

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 321 AVHLQCAPHCSTNSLGMTHGPVHPAIEDHAQSLLKLLVPLGAGKGAMIP 175
           AVH+ C P C  N+  +  GP  P +    Q + +  VP+  G+G   P
Sbjct: 320 AVHMWCNPGCKVNNYLVVVGP-SPNMPQDFQMMKQSRVPVVGGRGPPPP 367


>AY051932-1|AAK93356.1|  562|Drosophila melanogaster LD41462p
           protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +1

Query: 10  RRTTYWKYSRCIFWN*LLSILQPRQC*DSIPSWEVNVAVSGYAASAYMFGLAQLF 174
           R  +Y  Y  CI       + QP +   S  SW +N  V+G  A  ++F L QLF
Sbjct: 416 RYLSYLLYPLCICGAVYSLLYQPHR---SWYSWTLNSLVNGVYAFGFLFMLPQLF 467


>AE014298-1854|AAF48234.1|  562|Drosophila melanogaster CG4332-PA
           protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +1

Query: 10  RRTTYWKYSRCIFWN*LLSILQPRQC*DSIPSWEVNVAVSGYAASAYMFGLAQLF 174
           R  +Y  Y  CI       + QP +   S  SW +N  V+G  A  ++F L QLF
Sbjct: 416 RYLSYLLYPLCICGAVYSLLYQPHR---SWYSWTLNSLVNGVYAFGFLFMLPQLF 467


>AE014298-2696|AAF48822.1|  116|Drosophila melanogaster CG15061-PA
           protein.
          Length = 116

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 272 IPSEFVEQCGAHWRCT 319
           I S  V++CG HW CT
Sbjct: 68  INSPVVQRCGGHWACT 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,417,950
Number of Sequences: 53049
Number of extensions: 389756
Number of successful extensions: 1128
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)