Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021032
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061385-1|AAL28933.1|   49|Drosophila melanogaster LD30889p pro...    31   2.3  
X14247-1|CAA32463.1|  114|Drosophila melanogaster ribosomal prot...    29   6.9  
X13625-1|CAB38441.1|  114|Drosophila melanogaster protein ( Dros...    29   6.9  
AY069761-1|AAL39906.1|  114|Drosophila melanogaster RE01079p pro...    29   6.9  
AE014134-2931|AAN11005.1|  114|Drosophila melanogaster CG10305-P...    29   6.9  
AE014134-2930|AAF53666.1|  114|Drosophila melanogaster CG10305-P...    29   6.9  
AE014134-2929|AAN11004.1|  114|Drosophila melanogaster CG10305-P...    29   6.9  

>AY061385-1|AAL28933.1|   49|Drosophila melanogaster LD30889p
           protein.
          Length = 49

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +1

Query: 541 VVSSCYLR*TFFFFYI-SLSKHRHI 612
           ++SSC L+  FFFF++ SLS H H+
Sbjct: 7   IISSCGLKFFFFFFFLNSLSNHTHM 31


>X14247-1|CAA32463.1|  114|Drosophila melanogaster ribosomal protein
           S31 protein.
          Length = 114

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 260 IWHTYIIGTLLTETHYCFTAEIGKAVVPTR 349
           IW +Y++  L  + HYC +  I   VV  R
Sbjct: 58  IWDSYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>X13625-1|CAB38441.1|  114|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for putative ribosomal
           protein S31. ).
          Length = 114

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 260 IWHTYIIGTLLTETHYCFTAEIGKAVVPTR 349
           IW +Y++  L  + HYC +  I   VV  R
Sbjct: 58  IWDSYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AY069761-1|AAL39906.1|  114|Drosophila melanogaster RE01079p
           protein.
          Length = 114

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 260 IWHTYIIGTLLTETHYCFTAEIGKAVVPTR 349
           IW +Y++  L  + HYC +  I   VV  R
Sbjct: 58  IWDSYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AE014134-2931|AAN11005.1|  114|Drosophila melanogaster CG10305-PC,
           isoform C protein.
          Length = 114

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 260 IWHTYIIGTLLTETHYCFTAEIGKAVVPTR 349
           IW +Y++  L  + HYC +  I   VV  R
Sbjct: 58  IWDSYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AE014134-2930|AAF53666.1|  114|Drosophila melanogaster CG10305-PB,
           isoform B protein.
          Length = 114

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 260 IWHTYIIGTLLTETHYCFTAEIGKAVVPTR 349
           IW +Y++  L  + HYC +  I   VV  R
Sbjct: 58  IWDSYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AE014134-2929|AAN11004.1|  114|Drosophila melanogaster CG10305-PA,
           isoform A protein.
          Length = 114

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 260 IWHTYIIGTLLTETHYCFTAEIGKAVVPTR 349
           IW +Y++  L  + HYC +  I   VV  R
Sbjct: 58  IWDSYVLPKLYAKLHYCVSCAIHSKVVRNR 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,143,142
Number of Sequences: 53049
Number of extensions: 519893
Number of successful extensions: 996
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)