Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0015
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024960-1|ABE01190.1|  458|Drosophila melanogaster IP15509p pro...    29   5.7  
AE014298-1519|AAF47971.2|  458|Drosophila melanogaster CG1637-PB...    29   5.7  
AE014296-3144|AAF49165.1|  759|Drosophila melanogaster CG14087-P...    29   7.6  

>BT024960-1|ABE01190.1|  458|Drosophila melanogaster IP15509p
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 499 VRVVIWSHQQLHDRLWPSF 443
           V V IW+H+  ++RLWP +
Sbjct: 346 VDVAIWAHEHSYERLWPIY 364


>AE014298-1519|AAF47971.2|  458|Drosophila melanogaster CG1637-PB,
           isoform B protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 499 VRVVIWSHQQLHDRLWPSF 443
           V V IW+H+  ++RLWP +
Sbjct: 346 VDVAIWAHEHSYERLWPIY 364


>AE014296-3144|AAF49165.1|  759|Drosophila melanogaster CG14087-PA
           protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 64  IKGWLQ*CLEVYYNQIKLLIKE 129
           I+GWLQ C E    Q++LLI E
Sbjct: 426 IQGWLQQCSETISQQLQLLINE 447


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,333,039
Number of Sequences: 53049
Number of extensions: 513593
Number of successful extensions: 1106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)