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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10389
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical ...    46   4e-05
U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    39   0.004
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    39   0.004
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    39   0.004
AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical ...    39   0.004
Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi...    29   3.9  
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota...    29   3.9  
U00032-4|AAL32216.1|  953|Caenorhabditis elegans Rabphilin prote...    28   8.9  
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote...    28   8.9  
U00032-2|AAL32218.1|  962|Caenorhabditis elegans Rabphilin prote...    28   8.9  
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote...    28   8.9  
AF399852-1|AAK84870.1|  953|Caenorhabditis elegans rabphilin pro...    28   8.9  

>AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical
           protein Y51F10.8 protein.
          Length = 204

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = -3

Query: 168 AGHIARGTDNRWGQNVLDWRPRTERRSVDRSPTRY 64
           AGH+AR TD RW   + DW PR E+R V R P R+
Sbjct: 126 AGHVARRTDGRWTTLMNDWCPRDEKRPVGRPPMRW 160


>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 168 AGHIARGTDNRWGQNVLDWRPRTERRSVDRSPTRY 64
           AGH+AR  D RW   + +WRP   +R V R P R+
Sbjct: 815 AGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRW 849


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
            transcriptase protein.
          Length = 1066

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 168  AGHIARGTDNRWGQNVLDWRPRTERRSVDRSPTRY 64
            AGH+AR  D RW   + +WRP   +R V R P R+
Sbjct: 990  AGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRW 1024


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 168 AGHIARGTDNRWGQNVLDWRPRTERRSVDRSPTRY 64
           AGH+AR  D RW   + +WRP   +R V R P R+
Sbjct: 729 AGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRW 763


>AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical
           protein Y32G9A.9 protein.
          Length = 417

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 168 AGHIARGTDNRWGQNVLDWRPRTERRSVDRSPTRY 64
           AGH+AR  D RW   + +WRP   +R V R P R+
Sbjct: 341 AGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRW 375


>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
           protein F08B12.3c protein.
          Length = 1086

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 51  IGSCSILWETYPRYVFRYAVANQERSGPSGYPFHEQ 158
           I SC++L +     ++   V N ERS P  +PF E+
Sbjct: 46  IRSCNVLIKLLTCILYCIRVVNDERSYPDDFPFSEE 81


>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
           protein F08B12.3b protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 51  IGSCSILWETYPRYVFRYAVANQERSGPSGYPFHEQ 158
           I SC++L +     ++   V N ERS P  +PF E+
Sbjct: 67  IRSCNVLIKLLTCILYCIRVVNDERSYPDDFPFSEE 102


>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
           protein F08B12.3a protein.
          Length = 1119

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 51  IGSCSILWETYPRYVFRYAVANQERSGPSGYPFHEQ 158
           I SC++L +     ++   V N ERS P  +PF E+
Sbjct: 67  IRSCNVLIKLLTCILYCIRVVNDERSYPDDFPFSEE 102


>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
           channel protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 51  IGSCSILWETYPRYVFRYAVANQERSGPSGYPFHEQ 158
           I SC++L +     ++   V N ERS P  +PF E+
Sbjct: 67  IRSCNVLIKLLTCILYCIRVVNDERSYPDDFPFSEE 102


>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
           potassium channel Slo-2 protein.
          Length = 1119

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 51  IGSCSILWETYPRYVFRYAVANQERSGPSGYPFHEQ 158
           I SC++L +     ++   V N ERS P  +PF E+
Sbjct: 67  IRSCNVLIKLLTCILYCIRVVNDERSYPDDFPFSEE 102


>U00032-4|AAL32216.1|  953|Caenorhabditis elegans Rabphilin protein
           1, isoform a protein.
          Length = 953

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 347 TSTAAYRPPPSLATKTNPDVHCGTRPL 267
           + T+   PPP ++++T+PD +C + PL
Sbjct: 491 SGTSLVTPPPPISSRTSPD-NCNSSPL 516


>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
           1, isoform b protein.
          Length = 1028

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 347 TSTAAYRPPPSLATKTNPDVHCGTRPL 267
           + T+   PPP ++++T+PD +C + PL
Sbjct: 566 SGTSLVTPPPPISSRTSPD-NCNSSPL 591


>U00032-2|AAL32218.1|  962|Caenorhabditis elegans Rabphilin protein
           1, isoform c protein.
          Length = 962

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 347 TSTAAYRPPPSLATKTNPDVHCGTRPL 267
           + T+   PPP ++++T+PD +C + PL
Sbjct: 500 SGTSLVTPPPPISSRTSPD-NCNSSPL 525


>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
           1, isoform d protein.
          Length = 1106

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 347 TSTAAYRPPPSLATKTNPDVHCGTRPL 267
           + T+   PPP ++++T+PD +C + PL
Sbjct: 644 SGTSLVTPPPPISSRTSPD-NCNSSPL 669


>AF399852-1|AAK84870.1|  953|Caenorhabditis elegans rabphilin
           protein.
          Length = 953

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 347 TSTAAYRPPPSLATKTNPDVHCGTRPL 267
           + T+   PPP ++++T+PD +C + PL
Sbjct: 491 SGTSLVTPPPPISSRTSPD-NCNSSPL 516


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,621,249
Number of Sequences: 27780
Number of extensions: 413191
Number of successful extensions: 1235
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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