SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30100
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   171   5e-43
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       171   5e-43
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       171   5e-43
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   171   5e-43
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   171   5e-43
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   171   5e-43
Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   170   8e-43
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   170   8e-43
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       170   8e-43
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       164   5e-41
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   158   3e-39
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...    86   2e-17
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    75   6e-14
U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical pr...    73   1e-13
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    62   3e-10
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    58   4e-09
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    58   4e-09
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...    55   4e-08
U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol ...    29   2.8  
U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol ...    29   2.8  
U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol ...    29   2.8  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U28741-1|AAA68325.2|  256|Caenorhabditis elegans Hypothetical pr...    28   6.4  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    28   6.4  
AL032654-9|CAA21720.1|  404|Caenorhabditis elegans Hypothetical ...    27   8.5  

>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 213 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 272

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 273 EITALAPSTMKIKIIAPPERKY 294



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 298 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 243 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 302

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 303 EITALAPSTMKIKIIAPPERKY 324



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 328 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  170 bits (413), Expect = 8e-43
 Identities = 77/82 (93%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  170 bits (413), Expect = 8e-43
 Identities = 77/82 (93%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  170 bits (413), Expect = 8e-43
 Identities = 77/82 (93%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  164 bits (398), Expect = 5e-41
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAP TMKIKIIAPPERKY
Sbjct: 317 EITALAP-TMKIKIIAPPERKY 337



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  158 bits (384), Expect = 3e-39
 Identities = 72/82 (87%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPE LFQP+F+GME  GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQK
Sbjct: 256 RCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQK 315

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EI  LAPSTMKIKIIAPPERKY
Sbjct: 316 EIQHLAPSTMKIKIIAPPERKY 337



 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 40/80 (50%), Positives = 53/80 (66%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           R PE LF+P  +G E  G+      SIMKCDVD+R+ LY+N VLSGGTT++ G  DR+  
Sbjct: 255 RAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLG 314

Query: 182 EITALAPSTMKIKIIAPPER 241
           E+  +AP+  KI+I A  ER
Sbjct: 315 EMRKIAPADGKIRISASQER 334



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +1

Query: 199 PIDNED*DHCSSREEVLRMIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           P D +     S     L  IGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 321 PADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 74.5 bits (175), Expect = 6e-14
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
 Frame = +2

Query: 8   PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
           PE LFQP  + +E  G+ E  +  I   D+D R D Y + VLSGGTTMYPG+  R++KE+
Sbjct: 262 PEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKEL 321

Query: 188 TAL-----------APSTMKIKIIAPPERKY 247
             L           A    KI+I APP RK+
Sbjct: 322 KQLYLDRVLHGNTDAFQKFKIRIEAPPSRKH 352



 Score = 31.9 bits (69), Expect = 0.40
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
 Frame = +1

Query: 232 SREEVLRMIGGSILASL--STFQQMWISKQEYDESG 333
           SR+ ++  +GG++LA+L     Q  W+SK+EY+E G
Sbjct: 349 SRKHMV-FLGGAVLANLMKDRDQDFWVSKKEYEEGG 383


>U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical
           protein F42C5.9 protein.
          Length = 552

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 27/79 (34%), Positives = 53/79 (67%)
 Frame = +2

Query: 5   CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 184
           C E LF+P   G++  G+H+  + +I++C +D R+ LY N  L+GG ++ PGIA+++++E
Sbjct: 435 CTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQE 494

Query: 185 ITALAPSTMKIKIIAPPER 241
           ++ + P+T+  ++   P R
Sbjct: 495 LSTVVPNTIHTQVNISPWR 513


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 357
           IGGSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 402 IGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 166
           + PE LF   +L  E        + +    S    D+DIR  L++N  ++GG ++  G  
Sbjct: 309 KLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLILGFT 368

Query: 167 DRMQKEITALAPSTMKIKIIAPP---ERKY 247
           +R+   +    P T+K+++ A P   ERKY
Sbjct: 369 ERLNYALATKCPPTIKLRVFAAPTQAERKY 398


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 22/72 (30%), Positives = 43/72 (59%)
 Frame = +2

Query: 8   PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
           PE LF PS + ++ CG+ E    SI +C   +R  L  N ++ GG++ +PG  +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332

Query: 188 TALAPSTMKIKI 223
            ++ P+   + +
Sbjct: 333 RSMLPAEYGLNV 344


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 22/72 (30%), Positives = 43/72 (59%)
 Frame = +2

Query: 8   PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
           PE LF PS + ++ CG+ E    SI +C   +R  L  N ++ GG++ +PG  +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332

Query: 188 TALAPSTMKIKI 223
            ++ P+   + +
Sbjct: 333 RSMLPAEYGLNV 344


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 8   PEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 184
           PE  F P F   E    I +T    I +C +D+R+ LY N VLSGG+TM+   A ++Q++
Sbjct: 286 PEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRD 345

Query: 185 ITALAPSTMKI 217
           +  L+   +++
Sbjct: 346 VKRLSDGRLQM 356



 Score = 37.9 bits (84), Expect = 0.006
 Identities = 24/54 (44%), Positives = 29/54 (53%)
 Frame = +1

Query: 181 GNHSSRPIDNED*DHCSSREEVLRMIGGSILASLSTFQQMWISKQEYDESGPSI 342
           G    +PID +   H   R  V    GGS+LAS S F Q+  +K EY E GPSI
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAV--WFGGSMLASTSEFYQVSHTKAEYMERGPSI 414


>U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical
           protein C49H3.8 protein.
          Length = 305

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +2

Query: 80  IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKII 226
           + KC +D+RK L+ N +L+GG +  PG+  R+++EI  +   +  KI +I
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVI 247


>U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform b protein.
          Length = 144

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 247 VLPLWRSNDLNLHCRWGESCD 185
           VLPL   NDL+   +WG+ CD
Sbjct: 100 VLPLGTGNDLSRLLKWGKKCD 120


>U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform c protein.
          Length = 351

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 247 VLPLWRSNDLNLHCRWGESCD 185
           VLPL   NDL+   +WG+ CD
Sbjct: 100 VLPLGTGNDLSRLLKWGKKCD 120


>U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform a protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 247 VLPLWRSNDLNLHCRWGESCD 185
           VLPL   NDL+   +WG+ CD
Sbjct: 285 VLPLGTGNDLSRLLKWGKKCD 305


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 419  KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
            +P  + R  A GG DA+C+ K + C  E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653


>U28741-1|AAA68325.2|  256|Caenorhabditis elegans Hypothetical
           protein F35D2.3 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 316 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 417
           +Y ++G SIV+ KC  T R   P   R R LN G
Sbjct: 30  DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 419  KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
            +P  + R  A GG DA+C+ K + C  E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653


>AL032654-9|CAA21720.1|  404|Caenorhabditis elegans Hypothetical
           protein Y52B11A.9 protein.
          Length = 404

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 262 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 396
           G   A +S F    + K++ DE GPS   RK       S  PAA+
Sbjct: 221 GVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,465,230
Number of Sequences: 27780
Number of extensions: 280626
Number of successful extensions: 721
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -