Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30074
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 138 3e-33
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 138 3e-33
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 138 3e-33
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 138 3e-33
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 138 3e-33
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 81 5e-16
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 78 5e-15
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 78 5e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 73 2e-13
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 47 8e-06
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 44 7e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 2e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 36 0.015
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.026
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.026
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.034
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 35 0.045
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.14
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 32 0.24
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.2
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.2
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.0
U23528-8|AAK31386.2| 293|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 3.9
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 5.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 6.9
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 27 6.9
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 6.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 135 bits (327), Expect = 2e-32
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
Score = 91.5 bits (217), Expect = 4e-19
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 140
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 518 QKESTLHLV 526
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 534 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 594 QKESTLHLV 602
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 610 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 670 QKESTLHLV 678
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 686 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 746 QKESTLHLV 754
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 762 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 822 QKESTLHLV 830
Score = 135 bits (327), Expect = 2e-32
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 518 QKESTLHLV 526
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 534 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 594 QKESTLHLV 602
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 610 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 670 QKESTLHLV 678
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 686 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 746 QKESTLHLV 754
Score = 136 bits (330), Expect = 8e-33
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 762 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Query: 183 QKESTLHLV 209
QK+STLHLV
Sbjct: 822 QKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 138 bits (333), Expect = 3e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY +
Sbjct: 3 IKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVL 62
Query: 186 KESTLHLV 209
S LHLV
Sbjct: 63 GGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 81.0 bits (191), Expect = 5e-16
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
+ VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L YNI+
Sbjct: 163 VSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIR 222
Query: 186 KESTLHLV 209
E +HLV
Sbjct: 223 DEDIIHLV 230
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +3
Query: 21 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 200
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 201 HL 206
L
Sbjct: 152 RL 153
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 107
VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 63 VKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 77.8 bits (183), Expect = 5e-15
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 257 TPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKCHS 436
TP LAVL++YK+DENGKI RLR+E CG GVFMA +RHYCG+CH
Sbjct: 81 TPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHD 140
Query: 437 TMV 445
T+V
Sbjct: 141 TLV 143
Score = 57.2 bits (132), Expect = 7e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 186 KESTLHL 206
E+T+++
Sbjct: 57 SEATIYV 63
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 77.8 bits (183), Expect = 5e-15
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 257 TPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKCHS 436
TP LAVL++YK+DENGKI RLR+E CG GVFMA +RHYCG+CH
Sbjct: 81 TPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHD 140
Query: 437 TMV 445
T+V
Sbjct: 141 TLV 143
Score = 57.2 bits (132), Expect = 7e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 186 KESTLHL 206
E+T+++
Sbjct: 57 SEATIYV 63
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 110
QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 183 QKESTL 200
QK ST+
Sbjct: 214 QKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 47.2 bits (107), Expect = 8e-06
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSD 173
+I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL D
Sbjct: 104 RIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFD 162
Query: 174 YNIQKESTLHL 206
+ + STL L
Sbjct: 163 NSFENGSTLRL 173
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDYNIQK 188
+KT TGK IT+E S VK +++DK+G+ G Q +E T+ D IQ+
Sbjct: 5 IKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDVKIQE 59
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 6 IFVKTLTGKTITLEV 50
+FVKT TGKTIT+ +
Sbjct: 183 VFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.0 bits (99), Expect = 7e-05
Identities = 27/68 (39%), Positives = 35/68 (51%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 183 QKESTLHL 206
ST+ L
Sbjct: 99 SNNSTMDL 106
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +3
Query: 24 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLH 203
+G L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 204 L 206
L
Sbjct: 241 L 241
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 143
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 42 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 206
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 42 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 200
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 30 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 200
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.026
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 21 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 200
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 201 HL 206
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.026
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 21 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 200
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 201 HL 206
+L
Sbjct: 644 YL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 18 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 176
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 15 KTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLED 155
+TLT LE+ TI VKA + ++G P Q+LI+ GK L+D
Sbjct: 57 RTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 21 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 200
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+ I
Sbjct: 22 RVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAGI 81
Query: 183 QKESTLHLV 209
T+HLV
Sbjct: 82 SDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+ I
Sbjct: 22 RVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAGI 81
Query: 183 QKESTLHLV 209
T+HLV
Sbjct: 82 SDGQTVHLV 90
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 213 STPGGGWIPSGYCSPRGYVHLPAAFQQ 133
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 110
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U23528-8|AAK31386.2| 293|Caenorhabditis elegans Hypothetical
protein B0034.5 protein.
Length = 293
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 360 NSRRRRWILPFSSTL*NLRTASLTFFFLCLIFL 262
N RRR+ L S N+R A+ T F+C+I+L
Sbjct: 175 NRSRRRFSLRMQSRT-NVRQATATMLFICVIYL 206
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDYNIQK 188
+KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D IQ+
Sbjct: 5 IKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDVKIQE 59
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 155
Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++
Sbjct: 1150 QVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 126 LIFAGKQLEDGRTLSDYNIQKESTLHL 206
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 314 YKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKC 430
+ ++ + KIH+ R F+ +QCG VM D H+ KC
Sbjct: 136 FDLNRHMKIHQ-ERGFSCQQCGRSFLKQVMLDEHHL-KC 172
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 314 YKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKC 430
+ ++ + KIH+ R F+ +QCG VM D H+ KC
Sbjct: 185 FDLNRHMKIHQ-ERGFSCQQCGRSFLKQVMLDEHHL-KC 221
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 30 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRL 128
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,487,825
Number of Sequences: 27780
Number of extensions: 263650
Number of successful extensions: 809
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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