Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20019
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50857-1|CAC42285.1| 267|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF136240-1|AAD34464.1| 267|Caenorhabditis elegans DAF-12 B prot... 29 1.9
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 29 1.9
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 29 1.9
U80454-8|ABC71798.1| 623|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical pr... 29 3.2
U23524-6|AAC46820.1| 383|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 28 5.7
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical pr... 28 5.7
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 549 KFSLLKGGMIEMLTVRGVTRYDASTNS 575
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 524 KFSLLKGGMIEMLTVRGVTRYDASTNS 550
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 583 KFSLLKGGMIEMLTVRGVTRYDASTNS 609
>Z50857-1|CAC42285.1| 267|Caenorhabditis elegans Hypothetical
protein F11A1.3c protein.
Length = 267
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 97 KFSLLKGGMIEMLTVRGVTRYDASTNS 123
>AF136240-1|AAD34464.1| 267|Caenorhabditis elegans DAF-12 B
protein.
Length = 267
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 97 KFSLLKGGMIEMLTVRGVTRYDASTNS 123
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 524 KFSLLKGGMIEMLTVRGVTRYDASTNS 550
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNS 335
KF+LLK G+ + L VR + +DA NS
Sbjct: 583 KFSLLKGGMIEMLTVRGVTRYDASTNS 609
>U80454-8|ABC71798.1| 623|Caenorhabditis elegans Hypothetical
protein T16A1.1b protein.
Length = 623
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 155 QSEKEFSQRFAHV-IRGVIDF--AGLIPGFQLLTQDEIHAAQKWSVRC 289
+ EK+FS H I +I+ G L Q E H +KWS++C
Sbjct: 178 EDEKDFSDAVDHYNIPWIIEIIKTNEFLGIYLNCQKEYHEGRKWSIKC 225
>U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical
protein T16A1.1a protein.
Length = 650
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 155 QSEKEFSQRFAHV-IRGVIDF--AGLIPGFQLLTQDEIHAAQKWSVRC 289
+ EK+FS H I +I+ G L Q E H +KWS++C
Sbjct: 178 EDEKDFSDAVDHYNIPWIIEIIKTNEFLGIYLNCQKEYHEGRKWSIKC 225
>U23524-6|AAC46820.1| 383|Caenorhabditis elegans Hypothetical
protein C29F5.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -3
Query: 195 ITWAKRCENSFSDCSSGAGFSGQARVGCE*VGQSRALARMEATRSRVNSHVS 40
IT A + F+ C+ AG G R+ CE VG++ L RMEA+ HV+
Sbjct: 118 ITDAINLQKIFAFCNE-AG-EGLFRIDCERVGKTVLLTRMEASDLMEIGHVT 167
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 104 TYSQPTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGFQLLTQD 253
TY+ P+ CP L + + A + DFA ++P F+ QD
Sbjct: 12 TYTAPSQYCPSTVLSNLTLSCPYQDQEADASLEISDFAEVLPKFESAEQD 61
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 104 TYSQPTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGFQLLTQD 253
TY+ P+ CP L + + A + DFA ++P F+ QD
Sbjct: 12 TYTAPSQYCPSTVLSNLTLSCPYQDQEADASLEISDFAEVLPKFESAEQD 61
>U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical
protein T13C2.7 protein.
Length = 292
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 552 LSRECILSTSSMFRSRPIRSDEDYSQKSPISASVKF 445
LSR S SSM S P+ SD S K+ S +V F
Sbjct: 123 LSRSSRRSKSSMAESNPLNSDSTRSYKNENSLNVPF 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,071,054
Number of Sequences: 27780
Number of extensions: 263559
Number of successful extensions: 834
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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