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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0204.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41624-2|AAF99943.2|  351|Caenorhabditis elegans C.elegans homeo...    31   0.96 
AY349017-1|AAQ55497.1|  474|Caenorhabditis elegans NHR-91A protein.    31   0.96 
AL132841-4|CAB60329.2|  474|Caenorhabditis elegans Hypothetical ...    31   0.96 
AF273835-1|AAG15183.1|  476|Caenorhabditis elegans nuclear recep...    31   0.96 
AF273834-1|AAG15182.1|  475|Caenorhabditis elegans nuclear recep...    31   0.96 
AF273833-1|AAG15181.1|  475|Caenorhabditis elegans nuclear recep...    31   0.96 
AF244368-1|AAF77181.1|  351|Caenorhabditis elegans LIM homeobox ...    31   0.96 
U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U41021-4|AAA82334.1|  348|Caenorhabditis elegans Uncoordinated p...    28   8.9  
AF035583-1|AAD09435.1|  348|Caenorhabditis elegans UNC-97 protein.     28   8.9  

>U41624-2|AAF99943.2|  351|Caenorhabditis elegans C.elegans homeobox
           protein 14 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +2

Query: 383 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKC 508
           S   A   N + ++CS C + I +    +++ + +HS C +C
Sbjct: 34  SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRC 75


>AY349017-1|AAQ55497.1|  474|Caenorhabditis elegans NHR-91A protein.
          Length = 474

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 335 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCIF 514
           C   G+   G + GA++  E  +G  KRSV ++ +   +++N  EIDKQ   + C  C F
Sbjct: 100 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 157

Query: 515 ATRFHRPTSTSAM 553
                +   T A+
Sbjct: 158 RKCISKGMLTEAV 170


>AL132841-4|CAB60329.2|  474|Caenorhabditis elegans Hypothetical
           protein Y15E3A.1a protein.
          Length = 474

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 335 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCIF 514
           C   G+   G + GA++  E  +G  KRSV ++ +   +++N  EIDKQ   + C  C F
Sbjct: 100 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 157

Query: 515 ATRFHRPTSTSAM 553
                +   T A+
Sbjct: 158 RKCISKGMLTEAV 170


>AF273835-1|AAG15183.1|  476|Caenorhabditis elegans nuclear receptor
           NHR-91 protein.
          Length = 476

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 335 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCIF 514
           C   G+   G + GA++  E  +G  KRSV ++ +   +++N  EIDKQ   + C  C F
Sbjct: 102 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 159

Query: 515 ATRFHRPTSTSAM 553
                +   T A+
Sbjct: 160 RKCISKGMLTEAV 172


>AF273834-1|AAG15182.1|  475|Caenorhabditis elegans nuclear receptor
           NHR-91 protein.
          Length = 475

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 335 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCIF 514
           C   G+   G + GA++  E  +G  KRSV ++ +   +++N  EIDKQ   + C  C F
Sbjct: 101 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 158

Query: 515 ATRFHRPTSTSAM 553
                +   T A+
Sbjct: 159 RKCISKGMLTEAV 171


>AF273833-1|AAG15181.1|  475|Caenorhabditis elegans nuclear receptor
           NHR-91 protein.
          Length = 475

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 335 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCIF 514
           C   G+   G + GA++  E  +G  KRSV ++ +   +++N  EIDKQ   + C  C F
Sbjct: 101 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 158

Query: 515 ATRFHRPTSTSAM 553
                +   T A+
Sbjct: 159 RKCISKGMLTEAV 171


>AF244368-1|AAF77181.1|  351|Caenorhabditis elegans LIM homeobox
           protein CEH-14 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +2

Query: 383 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKC 508
           S   A   N + ++CS C + I +    +++ + +HS C +C
Sbjct: 34  SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRC 75


>U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical
           protein C52E12.1 protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +2

Query: 488 HSHCAKCIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNF 625
           H  CA+C+   R    + T  + +S   + S  T+  D+   P++F
Sbjct: 106 HPVCAECVIRMRILGNSKTCPVCRSDIDILSFCTTDDDLANVPLSF 151


>U41021-4|AAA82334.1|  348|Caenorhabditis elegans Uncoordinated
           protein 97 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 416 RSVCSRCLQMINENNKIEIDKQAFHSHCAKC 508
           R VC +C  MI++   I+    +FH +  KC
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKC 173


>AF035583-1|AAD09435.1|  348|Caenorhabditis elegans UNC-97 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 416 RSVCSRCLQMINENNKIEIDKQAFHSHCAKC 508
           R VC +C  MI++   I+    +FH +  KC
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKC 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,218,563
Number of Sequences: 27780
Number of extensions: 387341
Number of successful extensions: 1055
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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